readNuPoP {NuPoP} | R Documentation |
This function reads in the prediction results generated by predNuPoP
for specified region.
readNuPoP(file,startPos,endPos)
file |
the prediction output file name from |
startPos |
the start position in the DNA sequence for prediction results plotting. |
endPos |
the end position in the DNA sequence for prediction results plotting. |
library(NuPoP) predNuPoP(system.file("extdata", "test.seq", package="NuPoP"),species=7,model=4) ## the prediction results are stored in the current working directory ## the user should replace "system.file("extdata","test.seq_Prediction4.txt",package="NuPoP")" ## by the actual path and file name generated from prediction. temp=readNuPoP(system.file("extdata","test.seq_Prediction4.txt",package="NuPoP"),startPos=1,endPos=5000)