fastqTemplate {IONiseR}R Documentation

Extract template reads

Description

This generic function accesses the fastq slot stored in an object derived from the Fast5Summary class, and returns only the template reads.

Usage

fastqTemplate(x)

Arguments

x

Object of class Fast5Summary

Value

A ShortReadQ object

Examples

if( require(minionSummaryData) ) {
   data(s.typhi.rep2, package = 'minionSummaryData')
   fastqTemplate( s.typhi.rep2 )
}

[Package IONiseR version 2.10.0 Index]