filterCategory {HTqPCR}R Documentation

Filter Ct values based on their feature categories.

Description

Ct values corresponding to selected feature categories will be replaced by NA. Generally, the feature categories indicate how reliable the values are.

Usage

filterCategory(q, na.categories = c("Unreliable", "Undetermined"))

Arguments

q

a qPCRset object.

na.categories

character vector, with the name(s) of the feature categories where Ct values will be considered NA.

Value

A qPCRset object like the input, but with the selected Ct values replaced by NAs

Author(s)

Heidi Dvinge

See Also

setCategory for adjusting the categories.

Examples

data(qPCRraw)
qPCRraw2 <- setCategory(qPCRraw, groups=NULL)
x <- filterCategory(qPCRraw2)
summary(qPCRraw)
summary(x)

[Package HTqPCR version 1.40.0 Index]