heatmapD {DAPAR} | R Documentation |
heatmap.2
that displays
quantitative data in the exprs()
table of an object of
class MSnSet
Heatmap of the quantitative proteomic data of a MSnSet
object
heatmapD(qData, distance = "euclidean", cluster = "complete", dendro = FALSE)
qData |
A dataframe that contains quantitative data. |
distance |
The distance used by the clustering algorithm to compute
the dendrogram. See |
cluster |
the clustering algorithm used to build the dendrogram.
See |
dendro |
A boolean to indicate fi the dendrogram has to be displayed |
A heatmap
Florence Combes, Samuel Wieczorek
## Not run: utils::data(Exp1_R25_pept, package='DAPARdata') obj <- mvFilter(Exp1_R25_pept[1:1000], "wholeMatrix", 6) qData <- Biobase::exprs(obj) heatmapD(qData) ## End(Not run)