rc.meth.lvl {AlphaBeta}R Documentation

Calculating rc.Meth.lvl

Description

Estimating epimutation rates from high-throughput DNA methylation data

Usage

rc.meth.lvl(genTable, cytosine, posteriorMaxFilter)

Arguments

genTable

Generation table name, you can find sample file in "extdata" called "generations.fn"

cytosine

Type of cytosine (CHH/CHG/CG)

posteriorMaxFilter

Filter value, based on posteriorMax

Value

rc meth lvl.

Examples

## Get some toy data
file <- system.file("extdata","tm_generations.fn", package="AlphaBeta")
rc.meth.lvl(file, "CG", 0.99)

[Package AlphaBeta version 1.0.0 Index]