- Home
- Bioconductor 3.1
- Experiment Packages
- stjudem
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("stjudem")
In most cases, you don't need to download the package archive at all.
stjudem
|
|
|
|
|
Microarray Data from Yeoh et al. in MACAT format
Bioconductor version: Release (3.1)
This is a microarray data set on acute lymphoblastic leukemia, published in 2002 (Yeoh et al.Cancer Cell 2002). The experiments were conducted in the St.Jude Children's Research Hospital, Memphis, Tenessee, USA. The raw data was preprocessed by variance stabilizing normalization (Huber et al.) on probe and subsequent summarization of probe expression values into probe set expression values using median polish.
Author: Benjamin Georgi, Matthias Heinig, Sebastian Schmeier, Joern Toedling
Maintainer: Joern Toedling <toedling at ebi.ac.uk>
Citation (from within R,
enter citation("stjudem")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("stjudem")
Documentation
| Reference Manual |
Details
| biocViews | CancerData, ChipOnChipData, ExperimentData, LeukemiaCancerData, MicroarrayData |
| Version | 1.8.0 |
| License | LGPL (>= 2) |
| Depends | R (>= 2.10), utils |
| Imports | |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | macat |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | stjudem_1.8.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.6 (Snow Leopard) | |
| Mac OS X 10.9 (Mavericks) | |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/stjudem/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
