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To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("aroma.light")
In most cases, you don't need to download the package archive at all.
aroma.light
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Light-weight Methods for Normalization and Visualization of Microarray Data using Only Basic R Data Types
Bioconductor version: Release (3.1)
Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.
Author: Henrik Bengtsson [aut, cre, cph], Pierre Neuvial [ctb]
Maintainer: Henrik Bengtsson <henrikb at braju.com>
Citation (from within R,
enter citation("aroma.light")):
Installation
To install this package, start R and enter:
## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("aroma.light")
Documentation
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Infrastructure, Microarray, MultiChannel, OneChannel, Preprocessing, Software, TwoChannel, Visualization |
| Version | 2.4.0 |
| In Bioconductor since | BioC 1.9 (R-2.4) (9 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.14.0) |
| Imports | R.methodsS3 (>= 1.6.1), R.oo (>= 1.18.0), R.utils (>= 1.34.0), matrixStats (>= 0.14.0) |
| LinkingTo | |
| Suggests | princurve (>= 1.1-12) |
| SystemRequirements | |
| Enhances | |
| URL | http://www.aroma-project.org/ https://github.com/HenrikBengtsson/aroma.light/ |
| BugReports | https://github.com/HenrikBengtsson/aroma.light/issues |
| Depends On Me | |
| Imports Me | EDASeq |
| Suggests Me | TIN |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | aroma.light_2.4.0.tar.gz |
| Windows Binary | aroma.light_2.4.0.zip |
| Mac OS X 10.6 (Snow Leopard) | aroma.light_2.4.0.tgz |
| Mac OS X 10.9 (Mavericks) | aroma.light_2.4.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/aroma.light/tree/release-3.1 |
| Package Short Url | http://bioconductor.org/packages/aroma.light/ |
| Package Downloads Report | Download Stats |
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