To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("MethTargetedNGS")

In most cases, you don't need to download the package archive at all.

MethTargetedNGS

Perform Methylation Analysis on Next Generation Sequencing Data

Bioconductor version: Release (3.1)

Perform step by step methylation analysis of Next Generation Sequencing data.

Author: Muhammad Ahmer Jamil with Contribution of Prof. Holger Frohlich and Priv.-Doz. Dr. Osman El-Maarri

Maintainer: Muhammad Ahmer Jamil <engr.ahmerjamil at gmail.com>

Citation (from within R, enter citation("MethTargetedNGS")):

To install this package, start R and enter:

## try http if https is not available
source("https://bioconductor.org/biocLite.R")
biocLite("MethTargetedNGS")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MethTargetedNGS")

PDF	R Script	Introduction to MethTargetedNGS
PDF		Reference Manual

biocViews	Alignment, DataImport, Genetics, ResearchField, SequenceMatching, Sequencing, Software
Version	1.0.0
In Bioconductor since	BioC 3.1 (R-3.2) (< 6 months)
License	Artistic-2.0
Depends	R (>= 3.1.2), stringr, seqinr, gplots, Biostrings
Imports
LinkingTo
Suggests
SystemRequirements	HMMER3
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	MethTargetedNGS_1.0.0.tar.gz
Windows Binary	MethTargetedNGS_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	MethTargetedNGS_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	MethTargetedNGS_1.0.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/MethTargetedNGS/tree/release-3.1
Package Short Url	http://bioconductor.org/packages/MethTargetedNGS/
Package Downloads Report	Download Stats

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