To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MeSHDbi")

In most cases, you don't need to download the package archive at all.

MeSHDbi

DBI to construct MeSH-related package from sqlite file

Bioconductor version: 3.0

The package is unified implementation of MeSH.db, MeSH.AOR.db, and MeSH.PCR.db and also is interface to construct Gene-MeSH package (org.MeSH.XXX.db). loadMeSHDbiPkg import sqlite file and generate org.MeSH.XXX.db.

Author: Koki Tsuyuzaki

Maintainer: Koki Tsuyuzaki <k.t.the-answer at hotmail.co.jp>

Citation (from within R, enter citation("MeSHDbi")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("MeSHDbi")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MeSHDbi")

PDF	R Script	MeSH.db
PDF		Reference Manual
Text		NEWS

Details

biocViews	Annotation, AnnotationData, Infrastructure, Software
Version	1.2.7
In Bioconductor since	BioC 2.14 (R-3.1)
License	Artistic-2.0
Depends	R (>= 3.0.1)
Imports	methods, AnnotationDbi(>= 1.16.10), RSQLite, Biobase
LinkingTo
Suggests	RUnit, BiocGenerics
SystemRequirements
Enhances
URL
Depends On Me	MeSH.AOR.db, MeSH.db, MeSH.PCR.db, meshr, org.MeSH.Aca.db, org.MeSH.Aga.PEST.db, org.MeSH.Ame.db, org.MeSH.Aml.db, org.MeSH.Ana.db, org.MeSH.Ani.FGSC.db, org.MeSH.Ath.db, org.MeSH.Atu.K84.db, org.MeSH.Bfl.db, org.MeSH.Bsu.168.db, org.MeSH.Bsu.Bsn5.db, org.MeSH.Bsu.RONN1.db, org.MeSH.Bsu.TUB10.db, org.MeSH.Bsu.W23.db, org.MeSH.Bta.db, org.MeSH.Cal.SC5314.db, org.MeSH.Cbr.db, org.MeSH.Cel.db, org.MeSH.Cfa.db, org.MeSH.Cin.db, org.MeSH.Cja.db, org.MeSH.Cpo.db, org.MeSH.Cre.db, org.MeSH.Dan.db, org.MeSH.Dda.3937.db, org.MeSH.Ddi.AX4.db, org.MeSH.Der.db, org.MeSH.Dgr.db, org.MeSH.Dme.db, org.MeSH.Dmo.db, org.MeSH.Dpe.db, org.MeSH.Dre.db, org.MeSH.Dse.db, org.MeSH.Dsi.db, org.MeSH.Dvi.db, org.MeSH.Dya.db, org.MeSH.Eco.536.db, org.MeSH.Eco.55989.db, org.MeSH.Eco.APEC01.db, org.MeSH.Eco.B.REL606.db, org.MeSH.Eco.BW2952.db, org.MeSH.Eco.CFT073.db, org.MeSH.Eco.E24377A.db, org.MeSH.Eco.ED1a.db, org.MeSH.Eco.HS.db, org.MeSH.Eco.IAI1.db, org.MeSH.Eco.IAI39.db, org.MeSH.Eco.K12.DH10B.db, org.MeSH.Eco.K12.MG1655.db, org.MeSH.Eco.KO11FL.db, org.MeSH.Eco.O103.H2.12009.db, org.MeSH.Eco.O111.H.11128.db, org.MeSH.Eco.O127.H6.E2348.69.db, org.MeSH.Eco.O157.H7.EC4115.db, org.MeSH.Eco.O157.H7.EDL933.db, org.MeSH.Eco.O157.H7.Sakai.db, org.MeSH.Eco.O157.H7.TW14359.db, org.MeSH.Eco.O26.H11.11368.db, org.MeSH.Eco.O26.H7.CB9615.db, org.MeSH.Eco.S88.db, org.MeSH.Eco.SE11.db, org.MeSH.Eco.SMS35.db, org.MeSH.Eco.UMN026.db, org.MeSH.Eco.UTI89.db, org.MeSH.Eqc.db, org.MeSH.Gga.db, org.MeSH.Gma.db, org.MeSH.Hsa.db, org.MeSH.Laf.db, org.MeSH.Lma.db, org.MeSH.Mdo.db, org.MeSH.Mes.db, org.MeSH.Mga.db, org.MeSH.Miy.db, org.MeSH.Mml.db, org.MeSH.Mmu.db, org.MeSH.Mtr.db, org.MeSH.Nle.db, org.MeSH.Oan.db, org.MeSH.Ocu.db, org.MeSH.Oni.db, org.MeSH.Osa.db, org.MeSH.Pab.db, org.MeSH.Pae.LESB58.db, org.MeSH.Pae.PA14.db, org.MeSH.Pae.PA7.db, org.MeSH.Pae.PAO1.db, org.MeSH.Pfa.3D7.db, org.MeSH.Pto.db, org.MeSH.Ptr.db, org.MeSH.Rno.db, org.MeSH.Sau.COL.db, org.MeSH.Sau.ED98.db, org.MeSH.Sau.M013.db, org.MeSH.Sau.MRSA252.db, org.MeSH.Sau.MSHR1132.db, org.MeSH.Sau.MSSA476.db, org.MeSH.Sau.Mu3.db, org.MeSH.Sau.Mu50.db, org.MeSH.Sau.MW2.db, org.MeSH.Sau.N315.db, org.MeSH.Sau.Newman.db, org.MeSH.Sau.RF122.db, org.MeSH.Sau.USA300FPR3757.db, org.MeSH.Sau.USA300TCH1516.db, org.MeSH.Sau.VC40.db, org.MeSH.Sce.S288c.db, org.MeSH.Sco.A32.db, org.MeSH.Sil.db, org.MeSH.Spo.972h.db, org.MeSH.Spu.db, org.MeSH.Ssc.db, org.MeSH.Syn.db, org.MeSH.Tbr.9274.db, org.MeSH.Tgo.ME49.db, org.MeSH.Tgu.db, org.MeSH.Vvi.db, org.MeSH.Xla.db, org.MeSH.Xtr.db, org.MeSH.Zma.db
Imports Me
Suggests Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	MeSHDbi_1.2.7.tar.gz
Windows Binary	MeSHDbi_1.2.7.zip
Mac OS X 10.6 (Snow Leopard)	MeSHDbi_1.2.7.tgz
Mac OS X 10.9 (Mavericks)	MeSHDbi_1.2.7.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

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