To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

In most cases, you don't need to download the package archive at all.

phastCons100way.UCSC.hg19

UCSC phastCons conservation scores

Bioconductor version: 2.14

UCSC phastCons conservation scores from alignments of 100 vertebrate species

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("phastCons100way.UCSC.hg19")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("phastCons100way.UCSC.hg19")

Documentation

PDF   Reference Manual

Details

biocViews AnnotationData, ExperimentData, Genetics, Homo_sapiens, PhastConsDb
Version 1.0.0
License Artistic-2.0
Depends R (>= 3.0.0), VariantFiltering
Imports utils, IRanges, GenomicRanges, BSgenome
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me VariantFiltering

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source phastCons100way.UCSC.hg19_1.0.0.tar.gz
Windows Binary phastCons100way.UCSC.hg19_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) phastCons100way.UCSC.hg19_1.0.0.tgz
Mac OS X 10.9 (Mavericks) phastCons100way.UCSC.hg19_1.0.0.tgz
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