To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cgdv17")

In most cases, you don't need to download the package archive at all.

cgdv17

Complete Genomics Diversity Panel, chr17 on 46 individuals

Bioconductor version: 2.14

Complete Genomics Diversity Panel, chr17 on 46 individuals

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Citation (from within R, enter citation("cgdv17")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cgdv17")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cgdv17")

 

PDF R Script cgdv17: extract from Complete Genomics diversity panel
PDF   Reference Manual

Details

biocViews ExperimentData, genetics
Version 0.2.0
License Artistic 2.0
Depends R (>= 2.15), VariantAnnotation, org.Hs.eg.db, methods, GGtools, TxDb.Hsapiens.UCSC.hg19.knownGene, parallel
Imports Biobase, IRanges
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source cgdv17_0.2.0.tar.gz
Windows Binary cgdv17_0.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) cgdv17_0.2.0.tgz
Mac OS X 10.9 (Mavericks) cgdv17_0.2.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center