To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("AffymetrixDataTestFiles")

In most cases, you don't need to download the package archive at all.

AffymetrixDataTestFiles

Affymetrix data files (CEL, CDF, CHP, EXP, PSI) for testing

Bioconductor version: 2.14

This package contains annotation data files and sample data files of Affymetrix file formats. The files originate from the Affymetrix' Fusion SDK distribution.

Author: Henrik Bengtsson, James Bullard, Kasper Daniel Hansen

Maintainer: Henrik Bengtsson <hb at stat.berkeley.edu>

Citation (from within R, enter citation("AffymetrixDataTestFiles")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("AffymetrixDataTestFiles")

Documentation


PDF		Reference Manual

Details

biocViews	AnnotationData, ExperimentData, Microarray, OneChannel
Version	0.2.0
License	LGPL-2.1
Depends	R (>= 2.5.0)
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	affxparser, affyILM

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	AffymetrixDataTestFiles_0.2.0.tar.gz
Windows Binary	AffymetrixDataTestFiles_0.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	AffymetrixDataTestFiles_0.2.0.tgz
Mac OS X 10.9 (Mavericks)	AffymetrixDataTestFiles_0.2.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Oligonucleotide Arrays
High-throughput Sequencing
Counting Reads for Differential Expression (parathyroideSE vignette)
Annotation
Annotating Variants
Annotating Ranges
Flow Cytometry and other assays
Candidate Binding Sites for Known Transcription Factors
Cloud-enabled cis-eQTL search and annotation

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