- Home
- Bioconductor 2.14
- Annotation Packages
- seqnames.db
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("seqnames.db")
In most cases, you don't need to download the package archive at all.
seqnames.db
Chromosome Name translations
Bioconductor version: 2.14
Provides translation information for various kinds of chromosome name conventions.
Author: Marc Carlson, Herve Pages
Maintainer: Biocore Data Team <biocannotation at lists.fhcrc.org>
Citation (from within R,
enter citation("seqnames.db")):
Installation
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("seqnames.db")
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData |
| Version | 1.0.1 |
| License | Artistic-2.0 |
| Depends | R (>= 2.15.0), methods, AnnotationDbi(>= 1.19.4) |
| Imports | methods, AnnotationDbi |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | AnnotationDbi, GenomicFeatures, GenomicRanges |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | seqnames.db_1.0.1.tar.gz |
| Windows Binary | seqnames.db_1.0.1.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | seqnames.db_1.0.1.tgz |
| Mac OS X 10.9 (Mavericks) | seqnames.db_1.0.1.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Counting Reads for Differential Expression (parathyroideSE vignette)
- Annotation
- Annotating Variants
- Annotating Ranges
- Flow Cytometry and other assays
- Candidate Binding Sites for Known Transcription Factors
- Cloud-enabled cis-eQTL search and annotation
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: support.bioconductor.org
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2014
