A C D E F G H I L M N O P R S T U V

A

asData() - Method in class org.bioconductor.packages.rservices.RFactor

Gets the String[] representation of this RFactor.

asData() - Method in class org.bioconductor.packages.rservices.RJFactor

Gets the String[] representation of this RJFactor.

C

call(String, Object[], String, String) - Method in class org.bioconductor.packages.rservices.RServicesConnection

call(String, Object[]) - Method in class org.bioconductor.packages.rservices.RServicesEnv

code - Variable in class org.bioconductor.packages.rservices.RFactor

code - Variable in class org.bioconductor.packages.rservices.RJFactor

colNames - Variable in class org.bioconductor.packages.rservices.RJDataFrame

contents - Variable in class org.bioconductor.packages.rservices.RUnknown

D

data - Variable in class org.bioconductor.packages.rservices.RDataFrame

data - Variable in class org.bioconductor.packages.rservices.REnvironment

data - Variable in class org.bioconductor.packages.rservices.RJDataFrame

dataRData(String) - Method in class org.bioconductor.packages.rservices.RServicesEnv

dataRDataToJavaData(String, String) - Method in class org.bioconductor.packages.rservices.TestDataCreater

deepEquals(HashMap, HashMap) - Static method in class org.bioconductor.packages.rservices.RJUtil

dim - Variable in class org.bioconductor.packages.rservices.RArray

dim - Variable in class org.bioconductor.packages.rservices.RJArray

dim - Variable in class org.bioconductor.packages.rservices.RJMatrix

dimnames - Variable in class org.bioconductor.packages.rservices.RArray

dimnames - Variable in class org.bioconductor.packages.rservices.RJArray

dimnames - Variable in class org.bioconductor.packages.rservices.RJMatrix

E

e - Variable in class org.bioconductor.packages.rservices.RServicesEnv

equals(Object) - Method in class org.bioconductor.packages.rservices.FileReference

equals(Object) - Method in class org.bioconductor.packages.rservices.FileReferences

equals(Object) - Method in class org.bioconductor.packages.rservices.RArray

equals(Object) - Method in class org.bioconductor.packages.rservices.RChar

equals(Object) - Method in class org.bioconductor.packages.rservices.RComplex

equals(Object) - Method in class org.bioconductor.packages.rservices.RDataFrame

equals(Object) - Method in class org.bioconductor.packages.rservices.REnvironment

equals(Object) - Method in class org.bioconductor.packages.rservices.RFactor

equals(Object) - Method in class org.bioconductor.packages.rservices.RFileReferences

equals(Object) - Method in class org.bioconductor.packages.rservices.RInteger

equals(Object) - Method in class org.bioconductor.packages.rservices.RJCharArray

equals(Object) - Method in class org.bioconductor.packages.rservices.RJCharMatrix

equals(Object) - Method in class org.bioconductor.packages.rservices.RJComplex

equals(Object) - Method in class org.bioconductor.packages.rservices.RJComplexArray

equals(Object) - Method in class org.bioconductor.packages.rservices.RJComplexMatrix

equals(Object) - Method in class org.bioconductor.packages.rservices.RJDataFrame

equals(Object) - Method in class org.bioconductor.packages.rservices.RJFactor

equals(Object) - Method in class org.bioconductor.packages.rservices.RJFileReferences

equals(Object) - Method in class org.bioconductor.packages.rservices.RJIntegerArray

equals(Object) - Method in class org.bioconductor.packages.rservices.RJIntegerMatrix

equals(Object) - Method in class org.bioconductor.packages.rservices.RJLogicalArray

equals(Object) - Method in class org.bioconductor.packages.rservices.RJLogicalMatrix

equals(Object) - Method in class org.bioconductor.packages.rservices.RJNumericArray

equals(Object) - Method in class org.bioconductor.packages.rservices.RJNumericMatrix

equals(Object) - Method in class org.bioconductor.packages.rservices.RJRawArray

equals(Object) - Method in class org.bioconductor.packages.rservices.RJRawMatrix

equals(Object) - Method in class org.bioconductor.packages.rservices.RList

equals(Object) - Method in class org.bioconductor.packages.rservices.RLogical

equals(Object) - Method in class org.bioconductor.packages.rservices.RNumeric

equals(Object) - Method in class org.bioconductor.packages.rservices.RRaw

F

FileReference - Class in org.bioconductor.packages.rservices

FileReference() - Constructor for class org.bioconductor.packages.rservices.FileReference

FileReference(String, String, String) - Constructor for class org.bioconductor.packages.rservices.FileReference

FileReferences - Class in org.bioconductor.packages.rservices

FileReferences() - Constructor for class org.bioconductor.packages.rservices.FileReferences

FileReferences(ArrayList<FileReference>) - Constructor for class org.bioconductor.packages.rservices.FileReferences

FileReferences(FileReference[]) - Constructor for class org.bioconductor.packages.rservices.FileReferences

FileReferences(int) - Constructor for class org.bioconductor.packages.rservices.FileReferences

fileReferences - Variable in class org.bioconductor.packages.rservices.FileReferences

fileReferences - Variable in class org.bioconductor.packages.rservices.RFileReferences

fileReferences - Variable in class org.bioconductor.packages.rservices.RJFileReferences

G

getCode() - Method in class org.bioconductor.packages.rservices.RFactor

Gets the code value for this RFactor.

getCode() - Method in class org.bioconductor.packages.rservices.RJFactor

Gets the code value for this RJFactor.

getColNames() - Method in class org.bioconductor.packages.rservices.RJDataFrame

Gets the colNames value for this RJDataFrame.

getContents() - Method in class org.bioconductor.packages.rservices.RUnknown

Gets the contents for this RUnknown.

getData() - Method in class org.bioconductor.packages.rservices.RDataFrame

Gets the data for this RDataFrame.

getData() - Method in class org.bioconductor.packages.rservices.REnvironment

Gets the data for this REnvironment.

getData() - Method in class org.bioconductor.packages.rservices.RJDataFrame

Gets the data for this RJDataFrame.

getDim() - Method in class org.bioconductor.packages.rservices.RArray

Gets the dim value for this RArray.

getDim() - Method in class org.bioconductor.packages.rservices.RJArray

Gets the dimention for this RJArray.

getDim() - Method in class org.bioconductor.packages.rservices.RJMatrix

Gets the dimention for this RJMatrix.

getDimnames() - Method in class org.bioconductor.packages.rservices.RArray

Gets the dimnames value for this RArray.

getDimnames() - Method in class org.bioconductor.packages.rservices.RJArray

Gets the dimnames value for this RJArray.

getDimnames() - Method in class org.bioconductor.packages.rservices.RJMatrix

Gets the dimnames value for this RJMatrix.

getFileReferences() - Method in class org.bioconductor.packages.rservices.FileReferences

getImaginary() - Method in class org.bioconductor.packages.rservices.RComplex

Gets the imaginary for this RComplex.

getImaginary() - Method in class org.bioconductor.packages.rservices.RJComplex

Gets the imaginary for this RJComplex.

getIndexNA() - Method in class org.bioconductor.packages.rservices.RChar

Gets the NA indices for this RChar.

getIndexNA() - Method in class org.bioconductor.packages.rservices.RComplex

Gets the NA indices for this RComplex.

getIndexNA() - Method in class org.bioconductor.packages.rservices.RInteger

Gets the NA indices for this RInteger.

getIndexNA() - Method in class org.bioconductor.packages.rservices.RLogical

Gets the NA indices for this RLogical.

getIndexNA() - Method in class org.bioconductor.packages.rservices.RNumeric

Gets the NA indices for this RInteger.

getLength() - Method in class org.bioconductor.packages.rservices.RUnknown

Gets the length of this RUnknown.

getLevels() - Method in class org.bioconductor.packages.rservices.RFactor

Gets the levels for this RArray.

getLevels() - Method in class org.bioconductor.packages.rservices.RJFactor

Gets the levels for this RArray.

getLocalName() - Method in class org.bioconductor.packages.rservices.FileReference

getLocalNames() - Method in class org.bioconductor.packages.rservices.RFileReferences

getLocalNames() - Method in class org.bioconductor.packages.rservices.RJFileReferences

getNames() - Method in class org.bioconductor.packages.rservices.RList

Gets the names for this RList.

getNames() - Method in class org.bioconductor.packages.rservices.RVector

Gets the names for this RVector.

getOutputMsg() - Method in class org.bioconductor.packages.rservices.RObject

getRclass() - Method in class org.bioconductor.packages.rservices.RUnknown

Gets the rclass name for this RUnknown.

getReal() - Method in class org.bioconductor.packages.rservices.RComplex

Gets the real for this RComplex.

getReal() - Method in class org.bioconductor.packages.rservices.RJComplex

Gets the real for this RJComplex.

getRowNames() - Method in class org.bioconductor.packages.rservices.RDataFrame

Gets the rowNames value for this RDataFrame.

getRowNames() - Method in class org.bioconductor.packages.rservices.RJDataFrame

Gets the rowNames value for this RJDataFrame.

getType() - Method in class org.bioconductor.packages.rservices.FileReference

getTypes() - Method in class org.bioconductor.packages.rservices.RFileReferences

getTypes() - Method in class org.bioconductor.packages.rservices.RJFileReferences

getUrl() - Method in class org.bioconductor.packages.rservices.FileReference

getUrls() - Method in class org.bioconductor.packages.rservices.RFileReferences

getUrls() - Method in class org.bioconductor.packages.rservices.RJFileReferences

getValue() - Method in class org.bioconductor.packages.rservices.RArray

Gets the value for this RArray.

getValue() - Method in class org.bioconductor.packages.rservices.RChar

Gets the value for this RChar.

getValue() - Method in class org.bioconductor.packages.rservices.RInteger

Gets the value for this RInteger.

getValue() - Method in class org.bioconductor.packages.rservices.RJCharArray

Gets the value for this RJCharArray.

getValue() - Method in class org.bioconductor.packages.rservices.RJCharMatrix

Gets the value for this RJCharMatrix.

getValue() - Method in class org.bioconductor.packages.rservices.RJComplexArray

Gets the value for this RJComplexArray.

getValue() - Method in class org.bioconductor.packages.rservices.RJComplexMatrix

Gets the value for this RJComplexMatrix.

getValue() - Method in class org.bioconductor.packages.rservices.RJIntegerArray

Gets the value for this RJIntegerArray.

getValue() - Method in class org.bioconductor.packages.rservices.RJIntegerMatrix

Gets the value for this RJIntegerMatrix.

getValue() - Method in class org.bioconductor.packages.rservices.RJLogicalArray

Gets the value for this RJLogicalArray.

getValue() - Method in class org.bioconductor.packages.rservices.RJLogicalMatrix

Gets the value for this RJLogicalMatrix.

getValue() - Method in class org.bioconductor.packages.rservices.RJNumericArray

Gets the value for this RJNumericArray.

getValue() - Method in class org.bioconductor.packages.rservices.RJNumericMatrix

Gets the value for this RJNumericMatrix.

getValue() - Method in class org.bioconductor.packages.rservices.RJRawArray

Gets the value for this RJRawArray.

getValue() - Method in class org.bioconductor.packages.rservices.RJRawMatrix

Gets the value for this RJRawMatrix.

getValue() - Method in class org.bioconductor.packages.rservices.RList

Gets the value for this RList.

getValue() - Method in class org.bioconductor.packages.rservices.RLogical

Gets the value for this RLogical.

getValue() - Method in class org.bioconductor.packages.rservices.RNumeric

Gets the value for this RNumeric.

getValue() - Method in class org.bioconductor.packages.rservices.RRaw

Gets the value for this RRaw.

H

hashCode() - Method in class org.bioconductor.packages.rservices.FileReference

hashCode() - Method in class org.bioconductor.packages.rservices.FileReferences

hashCode() - Method in class org.bioconductor.packages.rservices.RFileReferences

hashCode() - Method in class org.bioconductor.packages.rservices.RJFileReferences

I

imaginary - Variable in class org.bioconductor.packages.rservices.RComplex

imaginary - Variable in class org.bioconductor.packages.rservices.RJComplex

importCvt(String) - Method in class org.bioconductor.packages.rservices.RServicesEnv

indexNA - Variable in class org.bioconductor.packages.rservices.RChar

indexNA - Variable in class org.bioconductor.packages.rservices.RComplex

indexNA - Variable in class org.bioconductor.packages.rservices.RInteger

indexNA - Variable in class org.bioconductor.packages.rservices.RLogical

indexNA - Variable in class org.bioconductor.packages.rservices.RNumeric

L

length() - Method in class org.bioconductor.packages.rservices.RChar

length() - Method in class org.bioconductor.packages.rservices.RComplex

length() - Method in class org.bioconductor.packages.rservices.RInteger

length() - Method in class org.bioconductor.packages.rservices.RJComplex

length() - Method in class org.bioconductor.packages.rservices.RLogical

length() - Method in class org.bioconductor.packages.rservices.RNumeric

length() - Method in class org.bioconductor.packages.rservices.RRaw

length - Variable in class org.bioconductor.packages.rservices.RUnknown

length() - Method in class org.bioconductor.packages.rservices.RVector

levels - Variable in class org.bioconductor.packages.rservices.RFactor

levels - Variable in class org.bioconductor.packages.rservices.RJFactor

loadRData(String) - Method in class org.bioconductor.packages.rservices.RServicesEnv

loadRDataToJavaData(String) - Method in class org.bioconductor.packages.rservices.TestDataCreater

localName - Variable in class org.bioconductor.packages.rservices.FileReference

M

mockJava2R(Object, String, String) - Method in class org.bioconductor.packages.rservices.MockService

mockR2Java(String, String) - Method in class org.bioconductor.packages.rservices.MockService

MockService - Class in org.bioconductor.packages.rservices

MockService(RServicesEnv) - Constructor for class org.bioconductor.packages.rservices.MockService

N

names - Variable in class org.bioconductor.packages.rservices.RList

names - Variable in class org.bioconductor.packages.rservices.RVector

O

org.bioconductor.packages.rservices - package org.bioconductor.packages.rservices

P

put(String, RObject) - Method in class org.bioconductor.packages.rservices.REnvironment

R

RArray - Class in org.bioconductor.packages.rservices

RArray() - Constructor for class org.bioconductor.packages.rservices.RArray

RArray(RVector) - Constructor for class org.bioconductor.packages.rservices.RArray

RArray(RVector, int[], RList) - Constructor for class org.bioconductor.packages.rservices.RArray

RChar - Class in org.bioconductor.packages.rservices

RChar() - Constructor for class org.bioconductor.packages.rservices.RChar

RChar(String) - Constructor for class org.bioconductor.packages.rservices.RChar

RChar(String[]) - Constructor for class org.bioconductor.packages.rservices.RChar

RChar(String[], int[], String[]) - Constructor for class org.bioconductor.packages.rservices.RChar

rclass - Variable in class org.bioconductor.packages.rservices.RUnknown

RComplex - Class in org.bioconductor.packages.rservices

RComplex() - Constructor for class org.bioconductor.packages.rservices.RComplex

RComplex(double[], double[], int[], String[]) - Constructor for class org.bioconductor.packages.rservices.RComplex

RDataFrame - Class in org.bioconductor.packages.rservices

RDataFrame() - Constructor for class org.bioconductor.packages.rservices.RDataFrame

RDataFrame(RList, String[]) - Constructor for class org.bioconductor.packages.rservices.RDataFrame

real - Variable in class org.bioconductor.packages.rservices.RComplex

real - Variable in class org.bioconductor.packages.rservices.RJComplex

REnvironment - Class in org.bioconductor.packages.rservices

REnvironment() - Constructor for class org.bioconductor.packages.rservices.REnvironment

RFactor - Class in org.bioconductor.packages.rservices

RFactor() - Constructor for class org.bioconductor.packages.rservices.RFactor

RFactor(String[], int[]) - Constructor for class org.bioconductor.packages.rservices.RFactor

RFileReferences - Class in org.bioconductor.packages.rservices

RFileReferences() - Constructor for class org.bioconductor.packages.rservices.RFileReferences

RFileReferences(FileReferences) - Constructor for class org.bioconductor.packages.rservices.RFileReferences

RFileReferences(RChar, RChar, RChar) - Constructor for class org.bioconductor.packages.rservices.RFileReferences

RInteger - Class in org.bioconductor.packages.rservices

RInteger() - Constructor for class org.bioconductor.packages.rservices.RInteger

RInteger(int) - Constructor for class org.bioconductor.packages.rservices.RInteger

RInteger(int[]) - Constructor for class org.bioconductor.packages.rservices.RInteger

RInteger(int[], int[], String[]) - Constructor for class org.bioconductor.packages.rservices.RInteger

RJArray - Class in org.bioconductor.packages.rservices

RJArray() - Constructor for class org.bioconductor.packages.rservices.RJArray

RJCharArray - Class in org.bioconductor.packages.rservices

RJCharArray() - Constructor for class org.bioconductor.packages.rservices.RJCharArray

RJCharArray(String[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJCharArray

RJCharMatrix - Class in org.bioconductor.packages.rservices

RJCharMatrix() - Constructor for class org.bioconductor.packages.rservices.RJCharMatrix

RJCharMatrix(String[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJCharMatrix

RJComplex - Class in org.bioconductor.packages.rservices

RJComplex() - Constructor for class org.bioconductor.packages.rservices.RJComplex

RJComplex(double[], double[]) - Constructor for class org.bioconductor.packages.rservices.RJComplex

RJComplexArray - Class in org.bioconductor.packages.rservices

RJComplexArray() - Constructor for class org.bioconductor.packages.rservices.RJComplexArray

RJComplexArray(RJComplex, int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJComplexArray

RJComplexMatrix - Class in org.bioconductor.packages.rservices

RJComplexMatrix() - Constructor for class org.bioconductor.packages.rservices.RJComplexMatrix

RJComplexMatrix(RJComplex, int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJComplexMatrix

RJDataFrame - Class in org.bioconductor.packages.rservices

RJDataFrame() - Constructor for class org.bioconductor.packages.rservices.RJDataFrame

RJDataFrame(Object[], String[], String[]) - Constructor for class org.bioconductor.packages.rservices.RJDataFrame

RJFactor - Class in org.bioconductor.packages.rservices

RJFactor() - Constructor for class org.bioconductor.packages.rservices.RJFactor

RJFactor(String[], int[]) - Constructor for class org.bioconductor.packages.rservices.RJFactor

RJFileReferences - Class in org.bioconductor.packages.rservices

RJFileReferences() - Constructor for class org.bioconductor.packages.rservices.RJFileReferences

RJFileReferences(FileReferences) - Constructor for class org.bioconductor.packages.rservices.RJFileReferences

RJFileReferences(String[], String[], String[]) - Constructor for class org.bioconductor.packages.rservices.RJFileReferences

RJIntegerArray - Class in org.bioconductor.packages.rservices

RJIntegerArray() - Constructor for class org.bioconductor.packages.rservices.RJIntegerArray

RJIntegerArray(int[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJIntegerArray

RJIntegerMatrix - Class in org.bioconductor.packages.rservices

RJIntegerMatrix() - Constructor for class org.bioconductor.packages.rservices.RJIntegerMatrix

RJIntegerMatrix(int[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJIntegerMatrix

RJLogicalArray - Class in org.bioconductor.packages.rservices

RJLogicalArray() - Constructor for class org.bioconductor.packages.rservices.RJLogicalArray

RJLogicalArray(boolean[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJLogicalArray

RJLogicalMatrix - Class in org.bioconductor.packages.rservices

RJLogicalMatrix() - Constructor for class org.bioconductor.packages.rservices.RJLogicalMatrix

RJLogicalMatrix(boolean[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJLogicalMatrix

RJMatrix - Class in org.bioconductor.packages.rservices

RJMatrix() - Constructor for class org.bioconductor.packages.rservices.RJMatrix

RJNumericArray - Class in org.bioconductor.packages.rservices

RJNumericArray() - Constructor for class org.bioconductor.packages.rservices.RJNumericArray

RJNumericArray(double[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJNumericArray

RJNumericMatrix - Class in org.bioconductor.packages.rservices

RJNumericMatrix() - Constructor for class org.bioconductor.packages.rservices.RJNumericMatrix

RJNumericMatrix(double[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJNumericMatrix

RJRawArray - Class in org.bioconductor.packages.rservices

RJRawArray() - Constructor for class org.bioconductor.packages.rservices.RJRawArray

RJRawArray(byte[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJRawArray

RJRawMatrix - Class in org.bioconductor.packages.rservices

RJRawMatrix() - Constructor for class org.bioconductor.packages.rservices.RJRawMatrix

RJRawMatrix(byte[], int[], Object[]) - Constructor for class org.bioconductor.packages.rservices.RJRawMatrix

RJUtil - Class in org.bioconductor.packages.rservices

RJUtil() - Constructor for class org.bioconductor.packages.rservices.RJUtil

RList - Class in org.bioconductor.packages.rservices

RList() - Constructor for class org.bioconductor.packages.rservices.RList

RList(Object[], String[]) - Constructor for class org.bioconductor.packages.rservices.RList

RLogical - Class in org.bioconductor.packages.rservices

RLogical() - Constructor for class org.bioconductor.packages.rservices.RLogical

RLogical(boolean) - Constructor for class org.bioconductor.packages.rservices.RLogical

RLogical(boolean[], int[], String[]) - Constructor for class org.bioconductor.packages.rservices.RLogical

rm(String) - Method in class org.bioconductor.packages.rservices.RServicesEnv

RMatrix - Class in org.bioconductor.packages.rservices

RMatrix() - Constructor for class org.bioconductor.packages.rservices.RMatrix

rmDataLoaderEnv() - Method in class org.bioconductor.packages.rservices.RServicesEnv

RNumeric - Class in org.bioconductor.packages.rservices

RNumeric() - Constructor for class org.bioconductor.packages.rservices.RNumeric

RNumeric(double) - Constructor for class org.bioconductor.packages.rservices.RNumeric

RNumeric(double[]) - Constructor for class org.bioconductor.packages.rservices.RNumeric

RNumeric(double[], int[], String[]) - Constructor for class org.bioconductor.packages.rservices.RNumeric

RObject - Class in org.bioconductor.packages.rservices

RObject() - Constructor for class org.bioconductor.packages.rservices.RObject

rowNames - Variable in class org.bioconductor.packages.rservices.RDataFrame

rowNames - Variable in class org.bioconductor.packages.rservices.RJDataFrame

RRaw - Class in org.bioconductor.packages.rservices

RRaw() - Constructor for class org.bioconductor.packages.rservices.RRaw

RRaw(byte[], String[]) - Constructor for class org.bioconductor.packages.rservices.RRaw

RServicesConnection - Class in org.bioconductor.packages.rservices

RServicesConnection(Connection, String, long) - Constructor for class org.bioconductor.packages.rservices.RServicesConnection

RServicesEnv - Class in org.bioconductor.packages.rservices

RServicesEnv() - Constructor for class org.bioconductor.packages.rservices.RServicesEnv

RUnknown - Class in org.bioconductor.packages.rservices

RUnknown() - Constructor for class org.bioconductor.packages.rservices.RUnknown

RVector - Class in org.bioconductor.packages.rservices

RVector() - Constructor for class org.bioconductor.packages.rservices.RVector

RVector(String[]) - Constructor for class org.bioconductor.packages.rservices.RVector

S

setCode(int[]) - Method in class org.bioconductor.packages.rservices.RFactor

Sets the code for this RFactor.

setCode(Integer) - Method in class org.bioconductor.packages.rservices.RFactor

Sets the code for this RFactor.

setCode(int[]) - Method in class org.bioconductor.packages.rservices.RJFactor

Sets the code for this RJFactor.

setCode(Integer) - Method in class org.bioconductor.packages.rservices.RJFactor

Sets the code for this RJFactor.

setColNames(String[]) - Method in class org.bioconductor.packages.rservices.RJDataFrame

Sets the colNames for this RJDataFrame.

setColNames(String) - Method in class org.bioconductor.packages.rservices.RJDataFrame

Sets the colNames for this RJDataFrame.

setContents(String) - Method in class org.bioconductor.packages.rservices.RUnknown

Sets the contents for this RUnknown.

setData(RList) - Method in class org.bioconductor.packages.rservices.RDataFrame

Sets the data for this RDataFrame.

setData(HashMap<String, RObject>) - Method in class org.bioconductor.packages.rservices.REnvironment

Sets the data for this REnvironment.

setData(Object[]) - Method in class org.bioconductor.packages.rservices.RJDataFrame

Sets the data for this RJDataFrame.

setDataLoaderEnv() - Method in class org.bioconductor.packages.rservices.RServicesEnv

setDim(int[]) - Method in class org.bioconductor.packages.rservices.RArray

Sets the dim value for this RArray.

setDim(int[]) - Method in class org.bioconductor.packages.rservices.RJArray

Sets the dimention for this RJArray.

setDim(int[]) - Method in class org.bioconductor.packages.rservices.RJMatrix

Sets the dimention for this RJMatrix.

setDimnames(RList) - Method in class org.bioconductor.packages.rservices.RArray

Sets the dimnames value for this RArray.

setDimnames(Object[]) - Method in class org.bioconductor.packages.rservices.RJArray

Sets the dimnames value for this RJArray.

setDimnames(Object[]) - Method in class org.bioconductor.packages.rservices.RJMatrix

Sets the dimnames value for this RJMatrix.

setFileReferences(ArrayList<FileReference>) - Method in class org.bioconductor.packages.rservices.FileReferences

setImaginary(double[]) - Method in class org.bioconductor.packages.rservices.RComplex

Sets the imaginary for this RComplex.

setImaginary(Double) - Method in class org.bioconductor.packages.rservices.RComplex

Sets the imaginary for this RComplex.

setImaginary(double[]) - Method in class org.bioconductor.packages.rservices.RJComplex

Sets the imaginary for this RJComplex.

setImaginary(Double) - Method in class org.bioconductor.packages.rservices.RJComplex

Sets the imaginary for this RJComplex.

setIndexNA(int[]) - Method in class org.bioconductor.packages.rservices.RChar

Sets the NA indices for this RChar, start from 0

setIndexNA(int[]) - Method in class org.bioconductor.packages.rservices.RComplex

Sets the NA indices for this RComplex, start from 0

setIndexNA(int[]) - Method in class org.bioconductor.packages.rservices.RInteger

Sets the NA indices for this RInteger, start from 0

setIndexNA(int[]) - Method in class org.bioconductor.packages.rservices.RLogical

Sets the NA indices for this RLogical, start from 0

setIndexNA(int[]) - Method in class org.bioconductor.packages.rservices.RNumeric

Sets the NA indices for this RInteger, start from 0

setLength(int) - Method in class org.bioconductor.packages.rservices.RUnknown

Sets the length for this RUnknown.

setLevels(String[]) - Method in class org.bioconductor.packages.rservices.RFactor

Sets the levels for this RFactor.

setLevels(String) - Method in class org.bioconductor.packages.rservices.RFactor

Sets the levels for this RFactor.

setLevels(String[]) - Method in class org.bioconductor.packages.rservices.RJFactor

Sets the levels for this RJFactor.

setLevels(String) - Method in class org.bioconductor.packages.rservices.RJFactor

Sets the levels for this RJFactor.

setLocalName(String) - Method in class org.bioconductor.packages.rservices.FileReference

setLocalNames(RChar) - Method in class org.bioconductor.packages.rservices.RFileReferences

setLocalNames(String[]) - Method in class org.bioconductor.packages.rservices.RJFileReferences

setNames(String[]) - Method in class org.bioconductor.packages.rservices.RList

Sets the names for this RList.

setNames(String) - Method in class org.bioconductor.packages.rservices.RList

Sets the names for this RList.

setNames(String[]) - Method in class org.bioconductor.packages.rservices.RVector

Sets the names for this RVector.

setOutputMsg(String) - Method in class org.bioconductor.packages.rservices.RObject

setRclass(String) - Method in class org.bioconductor.packages.rservices.RUnknown

Sets the rclass name for this RUnknown.

setReal(double[]) - Method in class org.bioconductor.packages.rservices.RComplex

Sets the real for this RComplex.

setReal(Double) - Method in class org.bioconductor.packages.rservices.RComplex

Sets the real for this RComplex.

setReal(double[]) - Method in class org.bioconductor.packages.rservices.RJComplex

Sets the real for this RJComplex.

setReal(Double) - Method in class org.bioconductor.packages.rservices.RJComplex

Sets the real for this RJComplex.

setRowNames(String[]) - Method in class org.bioconductor.packages.rservices.RDataFrame

Sets the rowNames for this RDataFrame.

setRowNames(String) - Method in class org.bioconductor.packages.rservices.RDataFrame

Sets the rowNames for this RDataFrame.

setRowNames(String[]) - Method in class org.bioconductor.packages.rservices.RJDataFrame

Sets the rowNames for this RJDataFrame.

setRowNames(String) - Method in class org.bioconductor.packages.rservices.RJDataFrame

Sets the rowNames for this RJDataFrame.

setType(String) - Method in class org.bioconductor.packages.rservices.FileReference

setTypes(RChar) - Method in class org.bioconductor.packages.rservices.RFileReferences

setTypes(String[]) - Method in class org.bioconductor.packages.rservices.RJFileReferences

setUrl(String) - Method in class org.bioconductor.packages.rservices.FileReference

setUrls(RChar) - Method in class org.bioconductor.packages.rservices.RFileReferences

setUrls(String[]) - Method in class org.bioconductor.packages.rservices.RJFileReferences

setValue(RVector) - Method in class org.bioconductor.packages.rservices.RArray

Sets the value for this RArray.

setValue(String[]) - Method in class org.bioconductor.packages.rservices.RChar

Sets the value for this RChar.

setValue(String) - Method in class org.bioconductor.packages.rservices.RChar

Sets the value for this RChar.

setValue(int[]) - Method in class org.bioconductor.packages.rservices.RInteger

Sets the value for this RInteger.

setValue(Integer) - Method in class org.bioconductor.packages.rservices.RInteger

Sets the value for this RInteger.

setValue(String[]) - Method in class org.bioconductor.packages.rservices.RJCharArray

Sets the value for this RJCharArray.

setValue(String[]) - Method in class org.bioconductor.packages.rservices.RJCharMatrix

Sets the value for this RJCharMatrix.

setValue(RJComplex) - Method in class org.bioconductor.packages.rservices.RJComplexArray

Sets the value for this RJComplexArray.

setValue(RJComplex) - Method in class org.bioconductor.packages.rservices.RJComplexMatrix

Sets the value for this RJComplexMatrix.

setValue(int[]) - Method in class org.bioconductor.packages.rservices.RJIntegerArray

Sets the value for this RJIntegerArray.

setValue(int[]) - Method in class org.bioconductor.packages.rservices.RJIntegerMatrix

Sets the value for this RJIntegerMatrix.

setValue(boolean[]) - Method in class org.bioconductor.packages.rservices.RJLogicalArray

Sets the value for this RJLogicalArray.

setValue(boolean[]) - Method in class org.bioconductor.packages.rservices.RJLogicalMatrix

Sets the value for this RJLogicalMatrix.

setValue(double[]) - Method in class org.bioconductor.packages.rservices.RJNumericArray

Sets the value for this RJNumericArray.

setValue(double[]) - Method in class org.bioconductor.packages.rservices.RJNumericMatrix

Sets the value for this RJNumericMatrix.

setValue(byte[]) - Method in class org.bioconductor.packages.rservices.RJRawArray

Sets the value for this RJRawArray.

setValue(byte[]) - Method in class org.bioconductor.packages.rservices.RJRawMatrix

Sets the value for this RJRawMatrix.

setValue(Object[]) - Method in class org.bioconductor.packages.rservices.RList

Sets the value for this RList.

setValue(boolean[]) - Method in class org.bioconductor.packages.rservices.RLogical

Sets the value for this RLogical.

setValue(Boolean) - Method in class org.bioconductor.packages.rservices.RLogical

Sets the value for this RLogical.

setValue(double[]) - Method in class org.bioconductor.packages.rservices.RNumeric

Sets the value for this RNumeric.

setValue(Double) - Method in class org.bioconductor.packages.rservices.RNumeric

Sets the value for this RNumeric.

setValue(byte[]) - Method in class org.bioconductor.packages.rservices.RRaw

Sets the value for this RRaw.

setValue(Byte) - Method in class org.bioconductor.packages.rservices.RRaw

Sets the value for this RRaw.

size() - Method in class org.bioconductor.packages.rservices.FileReferences

size() - Method in class org.bioconductor.packages.rservices.RFileReferences

source(String) - Method in class org.bioconductor.packages.rservices.RServicesEnv

T

TestDataCreater - Class in org.bioconductor.packages.rservices

TestDataCreater(RServicesEnv) - Constructor for class org.bioconductor.packages.rservices.TestDataCreater

toString() - Method in class org.bioconductor.packages.rservices.RArray

toString() - Method in class org.bioconductor.packages.rservices.RChar

toString() - Method in class org.bioconductor.packages.rservices.RComplex

toString() - Method in class org.bioconductor.packages.rservices.RDataFrame

toString() - Method in class org.bioconductor.packages.rservices.REnvironment

toString() - Method in class org.bioconductor.packages.rservices.RFactor

toString() - Method in class org.bioconductor.packages.rservices.RInteger

toString() - Method in class org.bioconductor.packages.rservices.RJCharArray

toString() - Method in class org.bioconductor.packages.rservices.RJCharMatrix

toString() - Method in class org.bioconductor.packages.rservices.RJComplex

toString() - Method in class org.bioconductor.packages.rservices.RJComplexArray

toString() - Method in class org.bioconductor.packages.rservices.RJComplexMatrix

toString() - Method in class org.bioconductor.packages.rservices.RJDataFrame

toString() - Method in class org.bioconductor.packages.rservices.RJFactor

toString() - Method in class org.bioconductor.packages.rservices.RJIntegerArray

toString() - Method in class org.bioconductor.packages.rservices.RJIntegerMatrix

toString() - Method in class org.bioconductor.packages.rservices.RJLogicalArray

toString() - Method in class org.bioconductor.packages.rservices.RJLogicalMatrix

toString() - Method in class org.bioconductor.packages.rservices.RJNumericArray

toString() - Method in class org.bioconductor.packages.rservices.RJNumericMatrix

toString() - Method in class org.bioconductor.packages.rservices.RJRawArray

toString() - Method in class org.bioconductor.packages.rservices.RJRawMatrix

toString() - Method in class org.bioconductor.packages.rservices.RList

toString() - Method in class org.bioconductor.packages.rservices.RLogical

toString() - Method in class org.bioconductor.packages.rservices.RNumeric

toString() - Method in class org.bioconductor.packages.rservices.RRaw

toString() - Method in class org.bioconductor.packages.rservices.RUnknown

type - Variable in class org.bioconductor.packages.rservices.FileReference

U

url - Variable in class org.bioconductor.packages.rservices.FileReference

V

value - Variable in class org.bioconductor.packages.rservices.RArray

value - Variable in class org.bioconductor.packages.rservices.RChar

value - Variable in class org.bioconductor.packages.rservices.RInteger

value - Variable in class org.bioconductor.packages.rservices.RJCharArray

value - Variable in class org.bioconductor.packages.rservices.RJCharMatrix

value - Variable in class org.bioconductor.packages.rservices.RJComplexArray

value - Variable in class org.bioconductor.packages.rservices.RJComplexMatrix

value - Variable in class org.bioconductor.packages.rservices.RJIntegerArray

value - Variable in class org.bioconductor.packages.rservices.RJIntegerMatrix

value - Variable in class org.bioconductor.packages.rservices.RJLogicalArray

value - Variable in class org.bioconductor.packages.rservices.RJLogicalMatrix

value - Variable in class org.bioconductor.packages.rservices.RJNumericArray

value - Variable in class org.bioconductor.packages.rservices.RJNumericMatrix

value - Variable in class org.bioconductor.packages.rservices.RJRawArray

value - Variable in class org.bioconductor.packages.rservices.RJRawMatrix

value - Variable in class org.bioconductor.packages.rservices.RList

value - Variable in class org.bioconductor.packages.rservices.RLogical

value - Variable in class org.bioconductor.packages.rservices.RNumeric

value - Variable in class org.bioconductor.packages.rservices.RRaw

A C D E F G H I L M N O P R S T U V