iterativeBMA

The Iterative Bayesian Model Averaging (BMA) algorithm

Bioconductor version: 2.6

The iterative Bayesian Model Averaging (BMA) algorithm is a variable selection and classification algorithm with an application of classifying 2-class microarray samples, as described in Yeung, Bumgarner and Raftery (Bioinformatics 2005, 21: 2394-2402).

Author: Ka Yee Yeung, University of Washington, Seattle, WA, with contributions from Adrian Raftery and Ian Painter

Maintainer: Ka Yee Yeung <kayee at u.washington.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("iterativeBMA")

To cite this package in a publication, start R and enter:

    citation("iterativeBMA")

Documentation

PDF R Script The Iterative Bayesian Model Averaging Algorithm
PDF   Reference Manual

Details

biocViews Microarray, Bioinformatics, Classification
Depends BMA, leaps, Biobase(>= 2.5.5)
Imports
Suggests
System Requirements
License GPL (>= 2)
URL http://faculty.washington.edu/kayee/research.html
Depends On Me
Imports Me
Suggests Me
Version 1.6.0
Since Bioconductor 2.3 (R-2.8)

Package Downloads

Package Source iterativeBMA_1.6.0.tar.gz
Windows Binary iterativeBMA_1.6.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary iterativeBMA_1.6.0.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center