############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.19-bioc/R/bin/Rscript -e "BiocCheck::BiocCheck('cytolib_2.17.0.tar.gz')" ### ############################################################################## ############################################################################## ─ BiocCheckVersion: 1.41.3 ─ BiocVersion: 3.20 ─ Package: cytolib ─ PackageVersion: 2.17.0 ─ sourceDir: /tmp/RtmpazbpKN/file3ade8052c85ddd/cytolib ─ installDir: /tmp/RtmpazbpKN/file3ade803df7570d ─ BiocCheckDir: /home/biocbuild/bbs-3.19-bioc-testing/meat/cytolib.BiocCheck ─ platform: unix ─ isTarBall: TRUE * Installing package... * Checking for deprecated package usage... * Checking for remote package usage... * Checking for 'LazyData: true' usage... * Checking version number... * Checking for version number mismatch... * Checking version number validity... * Checking R version dependency... * NOTE: Update R version dependency from 3.4 to 4.4.0. * Checking package size... * ERROR: Package tarball exceeds the Bioconductor size requirement. * Checking individual file sizes... * Checking biocViews... * Checking that biocViews are present... * Checking package type based on biocViews... Software * Checking for non-trivial biocViews... * Checking that biocViews come from the same category... * Checking biocViews validity... * Checking for recommended biocViews... * Checking build system compatibility... * Checking for blank lines in DESCRIPTION... * Checking if DESCRIPTION is well formatted... * Checking for proper Description: field... * WARNING: Description field in the DESCRIPTION file is too concise * Checking for whitespace in DESCRIPTION field names... * Checking that Package field matches directory/tarball name... * Checking for Version: field... * Checking for valid maintainer... * ERROR: Remove Maintainer field. Use Authors@R [cre] designation. * Checking License: for restrictive use... * NOTE: License 'AGPL-3.0-only' unknown; refer to $R_HOME/share/licenses/license.db and https://choosealicense.com/appendix/ for more info. * Checking for recommended DESCRIPTION fields... * NOTE: Provide 'URL', 'BugReports' field(s) in DESCRIPTION * Checking for Bioconductor software dependencies... Bioconductor dependencies found in Imports & Depends (100%). * Checking for pinned package versions in DESCRIPTION... * Checking .Rbuildignore... * Checking for stray BiocCheck output folders... * Checking vignette directory... * WARNING: Evaluate more vignette chunks. 1 out of 2 code chunks = 50% unevaluated 1 non-exec code chunk(s) (e.g., '```r') * NOTE: 'sessionInfo' not found in vignette(s) * Checking package installation calls in R code... * Checking for library/require of cytolib... * Checking coding practice... * NOTE: Avoid 'cat' and 'print' outside of 'show' methods * Checking parsed R code in R directory, examples, vignettes... * Checking function lengths... * Checking man page documentation... * WARNING: Empty or missing \value sections found in man page(s). * ERROR: At least 80% of man pages documenting exported objects must have runnable examples. * Checking package NEWS... * NOTE: Consider adding a NEWS file, so your package news will be included in Bioconductor release announcements. * Checking unit tests... * NOTE: Consider adding unit tests. We strongly encourage them. See https://contributions.bioconductor.org/tests.html * Checking skip_on_bioc() in tests... * Checking formatting of DESCRIPTION, NAMESPACE, man pages, R source, and vignette source... * NOTE: Consider shorter lines; 7 lines (9%) are > 80 characters long. * NOTE: Consider multiples of 4 spaces for line indents; 13 lines (16%) are not. See https://contributions.bioconductor.org/r-code.html See styler package: https://cran.r-project.org/package=styler as described in the BiocCheck vignette. * Checking if package already exists in CRAN... * Checking for bioc-devel mailing list subscription... * NOTE: Cannot determine whether maintainer is subscribed to the Bioc-Devel mailing list (requires admin credentials). Subscribe here: https://stat.ethz.ch/mailman/listinfo/bioc-devel * Checking for support site registration... * ERROR: Unable to find your email in the Support Site: HTTP 404 Not Found. ─ BiocCheck results ── 4 ERRORS | 3 WARNINGS | 10 NOTES See the cytolib.BiocCheck folder and run browseVignettes(package = 'BiocCheck') for details.