############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.19-bioc/R/bin/Rscript -e "BiocCheck::BiocCheck('ROC_1.81.0.tar.gz')" ### ############################################################################## ############################################################################## * Installing package... ─ sourceDir: /tmp/RtmpeqIrig/filef19816ce1fec1/ROC ─ BiocVersion: 3.20 ─ Package: ROC ─ PackageVersion: 1.81.0 ─ BiocCheckDir: /home/biocbuild/bbs-3.19-bioc-testing/meat/ROC.BiocCheck ─ BiocCheckVersion: 1.41.5 ─ sourceDir: /tmp/RtmpeqIrig/filef19816ce1fec1/ROC ─ installDir: /tmp/RtmpeqIrig/filef19816f6d2d35 ─ isTarBall: TRUE ─ platform: unix * Checking for deprecated package usage... * Checking for remote package usage... * Checking for 'LazyData: true' usage... * Checking version number... * Checking for version number mismatch... * Checking version number validity... * Checking R version dependency... * NOTE: Update R version dependency from 1.9.0 to 4.4.0. * Checking package size... * Checking individual file sizes... * Checking biocViews... * Checking that biocViews are present... * Checking package type based on biocViews... Software * Checking for non-trivial biocViews... * Checking that biocViews come from the same category... * Checking biocViews validity... * Checking for recommended biocViews... * NOTE: Consider adding these automatically suggested biocViews: Microarray, GO, Classification Search 'biocViews' at https://contributions.bioconductor.org * Checking build system compatibility... * Checking for proper Description: field... * Checking if DESCRIPTION is well formatted... * Checking for whitespace in DESCRIPTION field names... * Checking that Package field matches directory/tarball name... * Checking for Version: field... * ERROR: Remove Maintainer field. Use Authors@R [cre] designation. * Checking License: for restrictive use... * Checking for recommended DESCRIPTION fields... * NOTE: Provide 'BugReports' field(s) in DESCRIPTION * Checking for Bioconductor software dependencies... * WARNING: No Bioconductor dependencies detected. Note that some infrastructure packages may not have Bioconductor dependencies. For more information, reach out to the Bioconductor community and/or consider a CRAN submission. * Checking for pinned package versions in DESCRIPTION... * Checking .Rbuildignore... * Checking for stray BiocCheck output folders... * Checking vignette directory... * NOTE: 'sessionInfo' not found in vignette(s) * Checking package installation calls in R code... * Checking for library/require of ROC... * Checking coding practice... * NOTE: Avoid 1:...; use seq_len() or seq_along() * NOTE: Avoid using '=' for assignment and use '<-' instead * Checking parsed R code in R directory, examples, vignettes... * Checking function lengths... * Checking man page documentation... * WARNING: Empty or missing \value sections found in man page(s). * Checking package NEWS... * NOTE: Consider adding a NEWS file, so your package news will be included in Bioconductor release announcements. * Checking unit tests... * NOTE: Consider adding unit tests. We strongly encourage them. See https://contributions.bioconductor.org/tests.html * Checking skip_on_bioc() in tests... * Checking formatting of DESCRIPTION, NAMESPACE, man pages, R source, and vignette source... * NOTE: Consider shorter lines; 17 lines (1%) are > 80 characters long. * NOTE: Consider 4 spaces instead of tabs; 3 lines (0%) contain tabs. * NOTE: Consider multiples of 4 spaces for line indents; 100 lines (8%) are not. See https://contributions.bioconductor.org/r-code.html See styler package: https://cran.r-project.org/package=styler as described in the BiocCheck vignette. * Checking if package already exists in CRAN... * Checking for bioc-devel mailing list subscription... * NOTE: Cannot determine whether maintainer is subscribed to the Bioc-Devel mailing list (requires admin credentials). Subscribe here: https://stat.ethz.ch/mailman/listinfo/bioc-devel * Checking for support site registration... Maintainer is registered at support site. * ERROR: Add package to Watched Tags in your Support Site profile; visit https://support.bioconductor.org/accounts/edit/profile ─ BiocCheck results ── 2 ERRORS | 2 WARNINGS | 12 NOTES See the ROC.BiocCheck folder and run browseVignettes(package = 'BiocCheck') for details.