############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.19-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data scTensor ### ############################################################################## ############################################################################## * checking for file ‘scTensor/DESCRIPTION’ ... OK * preparing ‘scTensor’: * checking DESCRIPTION meta-information ... OK * installing the package to process help pages * saving partial Rd database * creating vignettes ... ERROR --- re-building ‘scTensor.Rmd’ using rmarkdown Warning: The label(s) fig:cellCellSetting not found --- finished re-building ‘scTensor.Rmd’ --- re-building ‘scTensor_1_Data_format_ID_Conversion.Rmd’ using rmarkdown Quitting from lines 152-164 [Ensembl with AnnotationHub] (scTensor_1_Data_format_ID_Conversion.Rmd) Error: processing vignette 'scTensor_1_Data_format_ID_Conversion.Rmd' failed with diagnostics: failed to load resource name: AH116710 title: org.Hs.eg.db.sqlite reason: file is not a database --- failed re-building ‘scTensor_1_Data_format_ID_Conversion.Rmd’ --- re-building ‘scTensor_2_Report_Interpretation.Rmd’ using rmarkdown Warning: call dbDisconnect() when finished working with a connection --- finished re-building ‘scTensor_2_Report_Interpretation.Rmd’ --- re-building ‘scTensor_3_CCI_Simulation.Rmd’ using rmarkdown --- finished re-building ‘scTensor_3_CCI_Simulation.Rmd’ --- re-building ‘scTensor_4_Reanalysis.Rmd’ using rmarkdown --- finished re-building ‘scTensor_4_Reanalysis.Rmd’ SUMMARY: processing the following file failed: ‘scTensor_1_Data_format_ID_Conversion.Rmd’ Error: Vignette re-building failed. Execution halted