############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r raer -R && E:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data raer ### ############################################################################## ############################################################################## * checking for file 'raer/DESCRIPTION' ... OK * preparing 'raer': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'raer.Rmd' using rmarkdown [E::hts_idx_load3] Could not load local index file 'E:\biocbuild\ExperimentHub_cache/45f0cec635d_8465' : Invalid argument [raer internal] fail to load bamfile index for E:\biocbuild\ExperimentHub_cache/45f070d6da4_8464 Quitting from lines 598-621 [unnamed-chunk-30] (raer.Rmd) Error: processing vignette 'raer.Rmd' failed with diagnostics: [raer internal] error detected during pileup --- failed re-building 'raer.Rmd' SUMMARY: processing the following file failed: 'raer.Rmd' Error: Vignette re-building failed. Execution halted