############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r scp -R && C:\Users\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data scp ### ############################################################################## ############################################################################## * checking for file 'scp/DESCRIPTION' ... OK * preparing 'scp': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'QFeatures_nutshell.Rmd' using rmarkdown Error: processing vignette 'QFeatures_nutshell.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'QFeatures_nutshell.Rmd' --- re-building 'advanced.Rmd' using rmarkdown Error: processing vignette 'advanced.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'advanced.Rmd' --- re-building 'read_scp.Rmd' using rmarkdown Error: processing vignette 'read_scp.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'read_scp.Rmd' --- re-building 'reporting_missing_values.Rmd' using rmarkdown Error: processing vignette 'reporting_missing_values.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'reporting_missing_values.Rmd' --- re-building 'scp.Rmd' using rmarkdown Error: processing vignette 'scp.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'scp.Rmd' --- re-building 'scp_data_modelling.Rmd' using rmarkdown Error: processing vignette 'scp_data_modelling.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'scp_data_modelling.Rmd' SUMMARY: processing the following files failed: 'QFeatures_nutshell.Rmd' 'advanced.Rmd' 'read_scp.Rmd' 'reporting_missing_values.Rmd' 'scp.Rmd' 'scp_data_modelling.Rmd' Error: Vignette re-building failed. Execution halted