############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r pRoloc -R && C:\Users\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data pRoloc ### ############################################################################## ############################################################################## * checking for file 'pRoloc/DESCRIPTION' ... OK * preparing 'pRoloc': * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'v01-pRoloc-tutorial.Rmd' using rmarkdown Error: processing vignette 'v01-pRoloc-tutorial.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'v01-pRoloc-tutorial.Rmd' --- re-building 'v02-pRoloc-ml.Rmd' using rmarkdown Error: processing vignette 'v02-pRoloc-ml.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'v02-pRoloc-ml.Rmd' --- re-building 'v03-pRoloc-bayesian.Rmd' using rmarkdown Error: processing vignette 'v03-pRoloc-bayesian.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'v03-pRoloc-bayesian.Rmd' --- re-building 'v04-pRoloc-goannotations.Rmd' using rmarkdown Error: processing vignette 'v04-pRoloc-goannotations.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'v04-pRoloc-goannotations.Rmd' --- re-building 'v05-pRoloc-transfer-learning.Rmd' using rmarkdown Error: processing vignette 'v05-pRoloc-transfer-learning.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'v05-pRoloc-transfer-learning.Rmd' SUMMARY: processing the following files failed: 'v01-pRoloc-tutorial.Rmd' 'v02-pRoloc-ml.Rmd' 'v03-pRoloc-bayesian.Rmd' 'v04-pRoloc-goannotations.Rmd' 'v05-pRoloc-transfer-learning.Rmd' Error: Vignette re-building failed. Execution halted