############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r iSEEpathways -R && C:\Users\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data iSEEpathways ### ############################################################################## ############################################################################## * checking for file 'iSEEpathways/DESCRIPTION' ... OK * preparing 'iSEEpathways': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'gene-ontology.Rmd' using rmarkdown Error: processing vignette 'gene-ontology.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'gene-ontology.Rmd' --- re-building 'iSEEpathways.Rmd' using rmarkdown Error: processing vignette 'iSEEpathways.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'iSEEpathways.Rmd' --- re-building 'integration.Rmd' using rmarkdown Error: processing vignette 'integration.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building 'integration.Rmd' SUMMARY: processing the following files failed: 'gene-ontology.Rmd' 'iSEEpathways.Rmd' 'integration.Rmd' Error: Vignette re-building failed. Execution halted