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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:ginmappeR.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings ginmappeR_1.1.2.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/ginmappeR.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.7
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ginmappeR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ginmappeR’ version ‘1.1.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  .BBSoptions
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘ginmappeR’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking whether startup messages can be suppressed ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
                           user system elapsed
getUniProt2NCBINucleotide 0.746  0.039 161.407
getCARD2KEGG              0.661  0.034  10.984
getCARD2UniProt           0.150  0.012   5.789
getNCBINucleotide2KEGG    0.083  0.008   6.668
getNCBIGene2KEGG          0.082  0.006   6.485
getNCBIProtein2KEGG       0.054  0.006  10.626
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘runTests.R’
 ERROR
Running the tests in ‘tests/runTests.R’ failed.
Last 13 lines of output:
  1 Test Suite : 
  ginmappeR RUnit Tests - 1 test function, 1 error, 0 failures
  ERROR in /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpRESnLz/RLIBS_34f52fc7fc15/ginmappeR/unitTests/test_UniProt.R: Error while sourcing  /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpRESnLz/RLIBS_34f52fc7fc15/ginmappeR/unitTests/test_UniProt.R : Error in RUnit::checkEquals(testFunction, result) : 
    Component 1: 3 string mismatches
  
  
  Test files with failing tests
  
     test_UniProt.R 
       /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpRESnLz/RLIBS_34f52fc7fc15/ginmappeR/unitTests/test_UniProt.R 
  
  
  Error in BiocGenerics:::testPackage("ginmappeR") : 
    unit tests failed for package ginmappeR
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 1 NOTE
See
  ‘/Users/biocbuild/bbs-3.20-bioc/meat/ginmappeR.Rcheck/00check.log’
for details.