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###
### Running command:
###
###   chmod a+r branchpointer -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data branchpointer
###
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* checking for file 'branchpointer/DESCRIPTION' ... OK
* preparing 'branchpointer':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'branchpointer.Rnw' using knitr
pdftex: major issue: User/administrator updates are out-of-sync.
pdfcrop: major issue: User/administrator updates are out-of-sync.
pdftex: major issue: User/administrator updates are out-of-sync.
pdfcrop: major issue: User/administrator updates are out-of-sync.
texify: major issue: User/administrator updates are out-of-sync.
Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "",  :
  running command '"C:\PROGRA~1\MiKTeX\miktex\bin\x64\texify.exe" --quiet --pdf "branchpointer.tex" --max-iterations=20 -I "F:/biocbuild/bbs-3.20-bioc/R/share/texmf/tex/latex" -I "F:/biocbuild/bbs-3.20-bioc/R/share/texmf/bibtex/bst"' had status 1
Error: processing vignette 'branchpointer.Rnw' failed with diagnostics:
running 'texi2dvi' on 'branchpointer.tex' failed

LaTeX errors:
ignettes/branchpointer.tex:96: Package xcolor Error: Undefined color `fgcolor'.


See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:114: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:124: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:133: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:152: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:170: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:197: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:277: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:345: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:374: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:395: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:423: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:458: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:470: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:572: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:617: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.
ignettes/branchpointer.tex:666: Package xcolor Error: Undefined color `fgcolor'
.

See the xcolor package documentation for explanation.
Type  H <return>  for immediate help.

--- failed re-building 'branchpointer.Rnw'

SUMMARY: processing the following file failed:
  'branchpointer.Rnw'

Error: Vignette re-building failed.
Execution halted