############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf VDJdive.buildbin-libdir && mkdir VDJdive.buildbin-libdir && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL --build --library=VDJdive.buildbin-libdir VDJdive_1.7.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'VDJdive' ... ** using non-staged installation via StagedInstall field ** libs using C++ compiler: 'G__~1.EXE (GCC) 13.2.0' g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.20-bioc/R/library/Rcpp/include' -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++17 -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG -I'F:/biocbuild/bbs-3.20-bioc/R/library/Rcpp/include' -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c TCR_EM.cpp -o TCR_EM.o g++ -std=gnu++17 -shared -s -static-libgcc -o VDJdive.dll tmp.def RcppExports.o TCR_EM.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR installing to F:/biocbuild/bbs-3.20-bioc/meat/VDJdive.buildbin-libdir/VDJdive/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded * MD5 sums packaged installation of 'VDJdive' as VDJdive_1.7.0.zip * DONE (VDJdive)