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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD check --install=check:RnaSeqSampleSize.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings RnaSeqSampleSize_2.15.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/RnaSeqSampleSize.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14)
    GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘RnaSeqSampleSize/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RnaSeqSampleSize’ version ‘2.15.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘RnaSeqSampleSize’ can be installed ... OK
* used C compiler: ‘gcc (GCC) 10.3.1’
* used C++ compiler: ‘g++ (GCC) 10.3.1’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
analyze_dataset: no visible binding for global variable ‘logFC’
analyze_dataset: no visible binding for global variable
  ‘DispersionInTreatmentVsControl’
analyze_dataset: no visible binding for global variable
  ‘DispersionInControlOnly’
plot_gene_counts_range: no visible binding for global variable ‘name’
plot_gene_counts_range: no visible binding for global variable ‘value’
plot_mappedReads_percent: no visible binding for global variable
  ‘Reads’
plot_mappedReads_percent: no visible binding for global variable
  ‘Category’
plot_mappedReads_percent: no visible binding for global variable
  ‘Tissue’
plot_mappedReads_percent: no visible binding for global variable
  ‘MappedReadsPercent’
Undefined global functions or variables:
  Category DispersionInControlOnly DispersionInTreatmentVsControl
  MappedReadsPercent Reads Tissue logFC name value
* checking Rd files ... NOTE
checkRd: (-1) plot_power_curve.Rd:42: Lost braces; missing escapes or markup?
    42 | \item{las}{Numeric in {0,1,2,3}; the style of axis labels.}
       |                       ^
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘RnaSeqSampleSize-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: convertIdOneToOne
> ### Title: convertId
> ### Aliases: convertIdOneToOne
> 
> ### ** Examples
> 
> x<-c("Q04837","P0C0L4","P0C0L5","O75379","Q13068","A2MYD1")
> convertIdOneToOne(x,filters="uniprotswissprot",verbose=TRUE)
Now conectting with ensembl. Internet acess is needed and it may use 30 seconds.
Error: Your query has been redirected to http://status.ensembl.org indicating this Ensembl service is currently unavailable.
Look at ?useEnsembl for details on how to try a mirror site.
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR, 3 NOTEs
See
  ‘/home/biocbuild/bbs-3.20-bioc/meat/RnaSeqSampleSize.Rcheck/00check.log’
for details.