############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r MultiRNAflow -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data MultiRNAflow ### ############################################################################## ############################################################################## * checking for file 'MultiRNAflow/DESCRIPTION' ... OK * preparing 'MultiRNAflow': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... 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Error: processing vignette 'MultiRNAflow_vignette-knitr.Rnw' failed with diagnostics: running 'texi2dvi' on 'MultiRNAflow_vignette-knitr.tex' failed LaTeX errors: gnettes/MultiRNAflow_vignette-knitr.tex:849: Package xcolor Error: Undefined co lor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:862: Package xcolor Error: Undefined co lor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:879: Package xcolor Error: Undefined co lor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:891: Package xcolor Error: Undefined co lor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:905: Package xcolor Error: Undefined co lor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:916: Package xcolor Error: Undefined co lor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:933: Package xcolor Error: Undefined co lor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1007: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1017: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1027: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1037: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1067: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1112: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1234: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1264: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1323: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1352: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1399: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1416: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1439: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1509: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1541: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1613: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1629: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1646: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1659: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1729: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1765: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1833: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1849: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1865: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1939: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:1977: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2055: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2073: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2132: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2159: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2229: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2244: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2335: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2403: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2416: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediate help. gnettes/MultiRNAflow_vignette-knitr.tex:2522: Package xcolor Error: Undefined c olor `fgcolor'. See the xcolor package documentation for explanation. Type H for immediat --- failed re-building 'MultiRNAflow_vignette-knitr.Rnw' SUMMARY: processing the following file failed: 'MultiRNAflow_vignette-knitr.Rnw' Error: Vignette re-building failed. In addition: Warning message: In system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "", : running command '"C:\PROGRA~1\MiKTeX\miktex\bin\x64\texify.exe" --quiet --pdf "MultiRNAflow_vignette-knitr.tex" --max-iterations=20 -I "F:/biocbuild/bbs-3.20-bioc/R/share/texmf/tex/latex" -I "F:/biocbuild/bbs-3.20-bioc/R/share/texmf/bibtex/bst"' had status 1 Execution halted