############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data CINdex ### ############################################################################## ############################################################################## * checking for file ‘CINdex/DESCRIPTION’ ... OK * preparing ‘CINdex’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘HowToDownloadCytobandInfo.Rmd’ using rmarkdown --- finished re-building ‘HowToDownloadCytobandInfo.Rmd’ --- re-building ‘PrepareInputData.Rmd’ using rmarkdown Quitting from lines 33-45 [unnamed-chunk-1] (PrepareInputData.Rmd) Error: processing vignette 'PrepareInputData.Rmd' failed with diagnostics: there is no package called 'pd.genomewidesnp.6' --- failed re-building ‘PrepareInputData.Rmd’ --- re-building ‘CINdex.Rnw’ using knitr --- finished re-building ‘CINdex.Rnw’ SUMMARY: processing the following file failed: ‘PrepareInputData.Rmd’ Error: Vignette re-building failed. Execution halted