############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r CATALYST -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data CATALYST ### ############################################################################## ############################################################################## * checking for file 'CATALYST/DESCRIPTION' ... OK * preparing 'CATALYST': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'differential.Rmd' using rmarkdown Quitting from lines 228-229 [clrDR-1] (differential.Rmd) Error: processing vignette 'differential.Rmd' failed with diagnostics: evaluation nested too deeply: infinite recursion / options(expressions=)? --- failed re-building 'differential.Rmd' --- re-building 'preprocessing.Rmd' using rmarkdown --- finished re-building 'preprocessing.Rmd' SUMMARY: processing the following file failed: 'differential.Rmd' Error: Vignette re-building failed. Execution halted