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INSTALL report for methylationArrayAnalysis on tokay2

This page was generated on 2019-01-30 16:00:22 -0500 (Wed, 30 Jan 2019).

Package 13/23HostnameOS / ArchINSTALLBUILD
methylationArrayAnalysis 1.7.0
Jovana Maksimovic
Snapshot Date: 2019-01-30 07:45:05 -0500 (Wed, 30 Jan 2019)
URL: https://git.bioconductor.org/packages/methylationArrayAnalysis
Branch: master
Last Commit: 026e5c2
Last Changed Date: 2018-10-31 15:07:31 -0500 (Wed, 31 Oct 2018)
malbec2 Linux (Ubuntu 18.04.1 LTS) / x86_64  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK 

Summary

Package: methylationArrayAnalysis
Version: 1.7.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/workflows/src/contrib/methylationArrayAnalysis_1.7.0.tar.gz && rm -rf methylationArrayAnalysis.buildbin-libdir && mkdir methylationArrayAnalysis.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methylationArrayAnalysis.buildbin-libdir methylationArrayAnalysis_1.7.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL methylationArrayAnalysis_1.7.0.zip && rm methylationArrayAnalysis_1.7.0.tar.gz methylationArrayAnalysis_1.7.0.zip
StartedAt: 2019-01-30 09:35:48 -0500 (Wed, 30 Jan 2019)
EndedAt: 2019-01-30 09:38:58 -0500 (Wed, 30 Jan 2019)
EllapsedTime: 189.8 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/workflows/src/contrib/methylationArrayAnalysis_1.7.0.tar.gz && rm -rf methylationArrayAnalysis.buildbin-libdir && mkdir methylationArrayAnalysis.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=methylationArrayAnalysis.buildbin-libdir methylationArrayAnalysis_1.7.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL methylationArrayAnalysis_1.7.0.zip && rm methylationArrayAnalysis_1.7.0.tar.gz methylationArrayAnalysis_1.7.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  3  216M    3 8208k    0     0  10.8M      0  0:00:20 --:--:--  0:00:20 10.8M
 13  216M   13 28.2M    0     0  16.8M      0  0:00:12  0:00:01  0:00:11 16.9M
 29  216M   29 63.2M    0     0  22.8M      0  0:00:09  0:00:02  0:00:07 22.8M
 38  216M   38 83.5M    0     0  22.7M      0  0:00:09  0:00:03  0:00:06 22.8M
 48  216M   48  105M    0     0  22.4M      0  0:00:09  0:00:04  0:00:05 22.5M
 57  216M   57  125M    0     0  22.1M      0  0:00:09  0:00:05  0:00:04 23.8M
 73  216M   73  159M    0     0  23.9M      0  0:00:09  0:00:06  0:00:03 26.3M
 93  216M   93  202M    0     0  26.4M      0  0:00:08  0:00:07  0:00:01 28.5M
100  216M  100  216M    0     0  26.7M      0  0:00:08  0:00:08 --:--:-- 30.0M

install for i386

* installing *source* package 'methylationArrayAnalysis' ...
** inst
** help
No man pages found in package  'methylationArrayAnalysis' 
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
Warning: replacing previous import 'DelayedMatrixStats::rowsum' by 'DelayedArray::rowsum' when loading 'minfi'
Warning: replacing previous import 'DelayedMatrixStats::colsum' by 'DelayedArray::colsum' when loading 'minfi'
Warning: replacing previous import 'DelayedArray::rowsum' by 'DelayedMatrixStats::rowsum' when loading 'bsseq'
Warning: replacing previous import 'DelayedArray::colsum' by 'DelayedMatrixStats::colsum' when loading 'bsseq'

install for x64

* installing *source* package 'methylationArrayAnalysis' ...
** testing if installed package can be loaded
Warning: replacing previous import 'DelayedMatrixStats::colsum' by 'DelayedArray::colsum' when loading 'minfi'
Warning: replacing previous import 'DelayedMatrixStats::rowsum' by 'DelayedArray::rowsum' when loading 'minfi'
Warning: replacing previous import 'DelayedArray::rowsum' by 'DelayedMatrixStats::rowsum' when loading 'bsseq'
Warning: replacing previous import 'DelayedArray::colsum' by 'DelayedMatrixStats::colsum' when loading 'bsseq'
* MD5 sums
packaged installation of 'methylationArrayAnalysis' as methylationArrayAnalysis_1.7.0.zip
* DONE (methylationArrayAnalysis)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'methylationArrayAnalysis' successfully unpacked and MD5 sums checked