Back to Multiple platform build/check report for BioC 3.9
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for chromPlot on tokay2

This page was generated on 2019-10-16 12:35:03 -0400 (Wed, 16 Oct 2019).

Package 272/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
chromPlot 1.12.0
Karen Y. Orostica
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/chromPlot
Branch: RELEASE_3_9
Last Commit: f7466bd
Last Changed Date: 2019-05-02 11:54:00 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  WARNINGS  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: chromPlot
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/chromPlot_1.12.0.tar.gz && rm -rf chromPlot.buildbin-libdir && mkdir chromPlot.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=chromPlot.buildbin-libdir chromPlot_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL chromPlot_1.12.0.zip && rm chromPlot_1.12.0.tar.gz chromPlot_1.12.0.zip
StartedAt: 2019-10-15 19:58:18 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:58:58 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 39.9 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/chromPlot_1.12.0.tar.gz && rm -rf chromPlot.buildbin-libdir && mkdir chromPlot.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=chromPlot.buildbin-libdir chromPlot_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL chromPlot_1.12.0.zip && rm chromPlot_1.12.0.tar.gz chromPlot_1.12.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  762k  100  762k    0     0  10.8M      0 --:--:-- --:--:-- --:--:-- 12.0M

install for i386

* installing *source* package 'chromPlot' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'chromPlot'
** help
*** installing help indices
  converting help for package 'chromPlot'
    finding HTML links ... done
    chromPlot-package                       html  
    chromPlot                               html  
    hg_cytoBandIdeo                         html  
    hg_gap                                  html  
    mm10_cytoBandIdeo                       html  
    mm10_gap                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'chromPlot'
** testing if installed package can be loaded from final location
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'chromPlot'
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'chromPlot' ...
** testing if installed package can be loaded
Warning: replacing previous import 'grDevices::windows' by 'GenomicRanges::windows' when loading 'chromPlot'
* MD5 sums
packaged installation of 'chromPlot' as chromPlot_1.12.0.zip
* DONE (chromPlot)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'chromPlot' successfully unpacked and MD5 sums checked