Back to Multiple platform build/check report for BioC 3.9
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for categoryCompare on tokay2

This page was generated on 2019-10-16 12:26:29 -0400 (Wed, 16 Oct 2019).

Package 216/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
categoryCompare 1.28.0
Robert M. Flight
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/categoryCompare
Branch: RELEASE_3_9
Last Commit: a073257
Last Changed Date: 2019-05-02 11:53:36 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: categoryCompare
Version: 1.28.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/categoryCompare_1.28.0.tar.gz && rm -rf categoryCompare.buildbin-libdir && mkdir categoryCompare.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=categoryCompare.buildbin-libdir categoryCompare_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL categoryCompare_1.28.0.zip && rm categoryCompare_1.28.0.tar.gz categoryCompare_1.28.0.zip
StartedAt: 2019-10-15 19:51:39 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:53:10 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 91.5 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/categoryCompare_1.28.0.tar.gz && rm -rf categoryCompare.buildbin-libdir && mkdir categoryCompare.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=categoryCompare.buildbin-libdir categoryCompare_1.28.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL categoryCompare_1.28.0.zip && rm categoryCompare_1.28.0.tar.gz categoryCompare_1.28.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  0 1767k    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1767k  100 1767k    0     0  5577k      0 --:--:-- --:--:-- --:--:-- 5684k

install for i386

* installing *source* package 'categoryCompare' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: ... may be used in an incorrect context 
** help
*** installing help indices
  converting help for package 'categoryCompare'
    finding HTML links ... done
    GENccEnrichResult-class                 html  
    finding level-2 HTML links ... done

    HyperGParamsCC-class                    html  
    HyperGResultCC-class                    html  
    breakEdges-methods                      html  
    categoryCompare-package                 html  
    ccCompare                               html  
    ccCompareCollection-class               html  
    ccCompareGeneric-methods                html  
    ccCompareResult-class                   html  
    ccData                                  html  
    ccEnrich                                html  
    ccEnrichCollection-class                html  
    ccEnrichResult-class                    html  
    ccGeneList-class                        html  
    ccOptions-class                         html  
    ccOutCyt-methods                        html  
    ccSigList-class                         html  
    cwReload-methods                        html  
    cytOutData-methods                      html  
    cytOutNodes-methods                     html  
    fdr                                     html  
    getGeneSymbol                           html  
    graphType-methods                       html  
    hyperGTestCC                            html  
    listNames                               html  
    mergeLists-methods                      html  
    mergedData-class                        html  
    minCount                                html  
    minNodes                                html  
    pvalueType                              html  
    resetColors-methods                     html  
    show-methods                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'categoryCompare' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'categoryCompare' as categoryCompare_1.28.0.zip
* DONE (categoryCompare)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'categoryCompare' successfully unpacked and MD5 sums checked