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INSTALL report for CellTrails on tokay2

This page was generated on 2019-10-16 12:41:47 -0400 (Wed, 16 Oct 2019).

Package 235/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellTrails 1.2.0
Daniel Ellwanger
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/CellTrails
Branch: RELEASE_3_9
Last Commit: c9b6512
Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CellTrails
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CellTrails_1.2.0.tar.gz && rm -rf CellTrails.buildbin-libdir && mkdir CellTrails.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellTrails.buildbin-libdir CellTrails_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CellTrails_1.2.0.zip && rm CellTrails_1.2.0.tar.gz CellTrails_1.2.0.zip
StartedAt: 2019-10-15 20:15:56 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:17:23 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 87.0 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CellTrails_1.2.0.tar.gz && rm -rf CellTrails.buildbin-libdir && mkdir CellTrails.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellTrails.buildbin-libdir CellTrails_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CellTrails_1.2.0.zip && rm CellTrails_1.2.0.tar.gz CellTrails_1.2.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 2171k  100 2171k    0     0  22.4M      0 --:--:-- --:--:-- --:--:-- 24.0M

install for i386

* installing *source* package 'CellTrails' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CellTrails'
    finding HTML links ... done
    addTrail                                html  
    connectStates                           html  
    contrastTrailExpr                       html  
    embedSamples                            html  
    enrichment.test                         html  
    exSCE                                   html  
    featureNames-SingleCellExperiment-method
                                            html  
    filterTrajFeaturesByCOV                 html  
    filterTrajFeaturesByDL                  html  
    filterTrajFeaturesByFF                  html  
    findSpectrum                            html  
    findStates                              html  
    fitDynamic                              html  
    fitTrajectory                           html  
    landmarks                               html  
    latentSpace-set                         html  
    latentSpace                             html  
    manifold2D-set                          html  
    manifold2D                              html  
    pca                                     html  
    phenoNames                              html  
    plotDynamic                             html  
    plotManifold                            html  
    plotMap                                 html  
    plotStateExpression                     html  
    plotStateSize                           html  
    plotStateTrajectory                     html  
    plotTrail                               html  
    plotTrajectoryFit                       html  
    read.ygraphml                           html  
    removeTrail                             html  
    sampleNames-SingleCellExperiment-method
                                            html  
    selectTrajectory                        html  
    showTrajInfo                            html  
    simulate_exprs                          html  
    stateTrajLayout-set                     html  
    states-set                              html  
    states                                  html  
    trailNames-set                          html  
    trailNames                              html  
    trails                                  html  
    trajComponents                          html  
    trajFeatureNames-set                    html  
    trajFeatureNames                        html  
    trajLayout-set                          html  
    trajLayout                              html  
    trajResiduals                           html  
    trajSampleNames                         html  
    userLandmarks-set                       html  
    userLandmarks                           html  
    write.ygraphml                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CellTrails' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CellTrails' as CellTrails_1.2.0.zip
* DONE (CellTrails)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CellTrails' successfully unpacked and MD5 sums checked