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INSTALL report for CHRONOS on tokay2

This page was generated on 2019-10-16 12:35:49 -0400 (Wed, 16 Oct 2019).

Package 276/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CHRONOS 1.12.0
Panos Balomenos
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/CHRONOS
Branch: RELEASE_3_9
Last Commit: 6fbd5ff
Last Changed Date: 2019-05-02 11:54:02 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: CHRONOS
Version: 1.12.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CHRONOS_1.12.0.tar.gz && rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CHRONOS_1.12.0.zip && rm CHRONOS_1.12.0.tar.gz CHRONOS_1.12.0.zip
StartedAt: 2019-10-15 19:49:35 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:50:53 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 77.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/CHRONOS_1.12.0.tar.gz && rm -rf CHRONOS.buildbin-libdir && mkdir CHRONOS.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CHRONOS.buildbin-libdir CHRONOS_1.12.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL CHRONOS_1.12.0.zip && rm CHRONOS_1.12.0.tar.gz CHRONOS_1.12.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  931k  100  931k    0     0  10.6M      0 --:--:-- --:--:-- --:--:-- 11.5M

install for i386

* installing *source* package 'CHRONOS' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CHRONOS'
    finding HTML links ... done
    CHRONOSrun                              html  
    convertMiRNANomenclature                html  
    convertNomenclature                     html  
    createPathwayGraphs                     html  
    downloadKEGGPathwayList                 html  
    downloadMiRecords                       html  
    downloadPathways                        html  
    extractLinearSubpathways                html  
    extractNonLinearSubpathways             html  
    getEdgeTypes                            html  
    importExpressions                       html  
    pathwayMeasures                         html  
    scoreSubpathways                        html  
    subpathwayKEGGmap                       html  
    subpathwayMiRNAs                        html  
    visualizeResults                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CHRONOS' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CHRONOS' as CHRONOS_1.12.0.zip
* DONE (CHRONOS)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'CHRONOS' successfully unpacked and MD5 sums checked