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BUILD report for brainImageR on tokay2

This page was generated on 2019-10-16 12:42:03 -0400 (Wed, 16 Oct 2019).

Package 183/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
brainImageR 1.2.0
Sara B Linker
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/brainImageR
Branch: RELEASE_3_9
Last Commit: 1fc8508
Last Changed Date: 2019-05-02 11:54:12 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  ERROR  skipped 
tokay2 Windows Server 2012 R2 Standard / x64  OK [ ERROR ] skipped  skipped 
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  ERROR  skipped  skipped 

Summary

Package: brainImageR
Version: 1.2.0
Command: chmod a+r brainImageR -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data brainImageR
StartedAt: 2019-10-16 01:10:15 -0400 (Wed, 16 Oct 2019)
EndedAt: 2019-10-16 01:16:14 -0400 (Wed, 16 Oct 2019)
EllapsedTime: 359.2 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   chmod a+r brainImageR -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data brainImageR
###
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* checking for file 'brainImageR/DESCRIPTION' ... OK
* preparing 'brainImageR':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'brainImageR.Rmd' using rmarkdown
Quitting from lines 44-55 (brainImageR.Rmd) 
Error: processing vignette 'brainImageR.Rmd' failed with diagnostics:
$ operator not defined for this S4 class
--- failed re-building 'brainImageR.Rmd'

SUMMARY: processing the following file failed:
  'brainImageR.Rmd'

Error: Vignette re-building failed.
Execution halted