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INSTALL report for bioassayR on tokay2

This page was generated on 2019-10-16 12:28:39 -0400 (Wed, 16 Oct 2019).

Package 138/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bioassayR 1.22.0
Tyler Backman
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/bioassayR
Branch: RELEASE_3_9
Last Commit: 507b8a7
Last Changed Date: 2019-05-02 11:53:45 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: bioassayR
Version: 1.22.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/bioassayR_1.22.0.tar.gz && rm -rf bioassayR.buildbin-libdir && mkdir bioassayR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bioassayR.buildbin-libdir bioassayR_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL bioassayR_1.22.0.zip && rm bioassayR_1.22.0.tar.gz bioassayR_1.22.0.zip
StartedAt: 2019-10-15 19:15:23 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 19:16:21 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 58.0 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/bioassayR_1.22.0.tar.gz && rm -rf bioassayR.buildbin-libdir && mkdir bioassayR.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=bioassayR.buildbin-libdir bioassayR_1.22.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL bioassayR_1.22.0.zip && rm bioassayR_1.22.0.tar.gz bioassayR_1.22.0.zip
###
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100  305k  100  305k    0     0  1322k      0 --:--:-- --:--:-- --:--:-- 1365k

install for i386

* installing *source* package 'bioassayR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'organism' in package 'bioassayR'
Creating a new generic function for 'organism<-' in package 'bioassayR'
** help
*** installing help indices
  converting help for package 'bioassayR'
    finding HTML links ... done
    BioAssayDB-class                        html  
    activeAgainst                           html  
    activeTargets                           html  
    addBioassayIndex                        html  
    addDataSource                           html  
    allCids                                 html  
    allTargets                              html  
    assaySetTargets                         html  
    bioactivityFingerprint                  html  
    bioassay-class                          html  
    bioassaySet-class                       html  
    connectBioassayDB                       html  
    crossReactivityProbability              html  
    disconnectBioassayDB                    html  
    dropBioassay                            html  
    dropBioassayIndex                       html  
    getAssay                                html  
    getAssays                               html  
    getBioassaySetByCids                    html  
    inactiveTargets                         html  
    loadBioassay                            html  
    loadIdMapping                           html  
    newBioassayDB                           html  
    parsePubChemBioassay                    html  
    perTargetMatrix                         html  
    queryBioassayDB                         html  
    samplebioassay                          html  
    scaleBioassaySet                        html  
    screenedAtLeast                         html  
    selectiveAgainst                        html  
    targetSelectivity                       html  
    translateTargetId                       html  
    trinarySimilarity                       html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'bioassayR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'bioassayR' as bioassayR_1.22.0.zip
* DONE (bioassayR)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'bioassayR' successfully unpacked and MD5 sums checked