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INSTALL report for BioMM on tokay2

This page was generated on 2019-10-16 12:43:26 -0400 (Wed, 16 Oct 2019).

Package 161/1741HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioMM 1.0.0
Junfang Chen
Snapshot Date: 2019-10-15 17:01:26 -0400 (Tue, 15 Oct 2019)
URL: https://git.bioconductor.org/packages/BioMM
Branch: RELEASE_3_9
Last Commit: d531675
Last Changed Date: 2019-05-02 11:54:14 -0400 (Thu, 02 May 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BioMM
Version: 1.0.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/BioMM_1.0.0.tar.gz && rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioMM.buildbin-libdir BioMM_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL BioMM_1.0.0.zip && rm BioMM_1.0.0.tar.gz BioMM_1.0.0.zip
StartedAt: 2019-10-15 20:07:14 -0400 (Tue, 15 Oct 2019)
EndedAt: 2019-10-15 20:08:21 -0400 (Tue, 15 Oct 2019)
EllapsedTime: 67.5 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.9/bioc/src/contrib/BioMM_1.0.0.tar.gz && rm -rf BioMM.buildbin-libdir && mkdir BioMM.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioMM.buildbin-libdir BioMM_1.0.0.tar.gz && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL BioMM_1.0.0.zip && rm BioMM_1.0.0.tar.gz BioMM_1.0.0.zip
###
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100 3290k  100 3290k    0     0  30.6M      0 --:--:-- --:--:-- --:--:-- 32.4M

install for i386

* installing *source* package 'BioMM' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BioMM'
    finding HTML links ... done
    BioMM                                   html  
    BioMMreconData                          html  
    BioMMstage1pca                          html  
    BioMMstage2pred                         html  
    baseGLMnet                              html  
    baseModel                               html  
    baseRandForest                          html  
    baseSVM                                 html  
    classifiACC                             html  
    getDataAfterFS                          html  
    getMetrics                              html  
    omics2chrlist                           html  
    omics2genelist                          html  
    omics2pathlist                          html  
    plotRankedFeature                       html  
    plotVarExplained                        html  
    predByBS                                html  
    predByCV                                html  
    predByFS                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BioMM' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BioMM' as BioMM_1.0.0.zip
* DONE (BioMM)
* installing to library 'C:/Users/biocbuild/bbs-3.9-bioc/R/library'
package 'BioMM' successfully unpacked and MD5 sums checked