Back to Multiple platform build/check report for BioC 3.9
[A]BCDEFGHIJKLMNOPQRSTUVWXYZ

BUILD BIN report for apeglm on tokay2

This page was generated on 2019-04-09 12:32:28 -0400 (Tue, 09 Apr 2019).

Package 69/1703HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
apeglm 1.5.4
Anqi Zhu
Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019)
URL: https://git.bioconductor.org/packages/apeglm
Branch: master
Last Commit: d9b4f5c
Last Changed Date: 2019-04-02 15:56:26 -0400 (Tue, 02 Apr 2019)
malbec2 Linux (Ubuntu 18.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  OK [ OK ]UNNEEDED, same version exists in internal repository
celaya2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK 

Summary

Package: apeglm
Version: 1.5.4
Command: rm -rf apeglm.buildbin-libdir && mkdir apeglm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=apeglm.buildbin-libdir apeglm_1.5.4.tar.gz
StartedAt: 2019-04-09 07:26:01 -0400 (Tue, 09 Apr 2019)
EndedAt: 2019-04-09 07:28:31 -0400 (Tue, 09 Apr 2019)
EllapsedTime: 149.2 seconds
RetCode: 0
Status:  OK  
PackageFile: apeglm_1.5.4.zip
PackageFileSize: 1.005 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf apeglm.buildbin-libdir && mkdir apeglm.buildbin-libdir && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=apeglm.buildbin-libdir apeglm_1.5.4.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'apeglm' ...
** libs
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nbinomGLM.cpp -o nbinomGLM.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o apeglm.dll tmp.def RcppExports.o nbinomGLM.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/apeglm.buildbin-libdir/00LOCK-apeglm/00new/apeglm/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'apeglm'
    finding HTML links ... done
    apeglm                                  html  
    bbEstDisp                               html  
    logLikNB                                html  
    svalue                                  html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'apeglm' ...
** libs
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++  -I"C:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppEigen/include" -I"C:/Users/biocbuild/bbs-3.9-bioc/R/library/RcppNumerical/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=generic -c nbinomGLM.cpp -o nbinomGLM.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o apeglm.dll tmp.def RcppExports.o nbinomGLM.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU˜1/BBS-3˜1.9-B/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.9-bioc/meat/apeglm.buildbin-libdir/apeglm/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'apeglm' as apeglm_1.5.4.zip
* DONE (apeglm)