Bioconductor Package Maintainer
| Snapshot Date: 2019-04-08 17:01:18 -0400 (Mon, 08 Apr 2019) |
| URL: https://git.bioconductor.org/packages/AnnotationHub |
| Branch: master |
| Last Commit: 1e1d17b |
| Last Changed Date: 2019-03-29 14:21:32 -0400 (Fri, 29 Mar 2019) |
| Back to Multiple platform build/check report for BioC 3.9 |
|
This page was generated on 2019-04-09 12:02:40 -0400 (Tue, 09 Apr 2019).
| Package 61/1703 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| AnnotationHub 2.15.12 Bioconductor Package Maintainer
| malbec2 | Linux (Ubuntu 18.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | [ ERROR ] | skipped | skipped | |||||||
| celaya2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK | | ||||||
| merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | OK |
| Package: AnnotationHub |
| Version: 2.15.12 |
| Command: chmod a+r AnnotationHub -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data AnnotationHub |
| StartedAt: 2019-04-08 21:57:31 -0400 (Mon, 08 Apr 2019) |
| EndedAt: 2019-04-08 22:00:51 -0400 (Mon, 08 Apr 2019) |
| EllapsedTime: 199.9 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r AnnotationHub -R && C:\Users\biocbuild\bbs-3.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data AnnotationHub
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* checking for file 'AnnotationHub/DESCRIPTION' ... OK
* preparing 'AnnotationHub':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'AnnotationHub-HOWTO.Rmd' using rmarkdown
downloading 0 resources
loading from cache
'AH57960 : 64702'
'AH57960 : 64703'
Quitting from lines 320-322 (AnnotationHub-HOWTO.Rmd)
Error: processing vignette 'AnnotationHub-HOWTO.Rmd' failed with diagnostics:
scanVcf: missing value where TRUE/FALSE needed
path: C:\Users\biocbuild\AppData\Local\AnnotationHub\AnnotationHub\Cache/133041a15b0b_64702
--- failed re-building 'AnnotationHub-HOWTO.Rmd'
--- re-building 'AnnotationHub.Rmd' using rmarkdown
--- finished re-building 'AnnotationHub.Rmd'
--- re-building 'CreateAnAnnotationPackage.Rmd' using rmarkdown
--- finished re-building 'CreateAnAnnotationPackage.Rmd'
--- re-building 'TroubleshootingTheCache.Rmd' using rmarkdown
--- finished re-building 'TroubleshootingTheCache.Rmd'
SUMMARY: processing the following file failed:
'AnnotationHub-HOWTO.Rmd'
Error: Vignette re-building failed.
Execution halted