Back to Multiple platform build/check report for BioC 3.8
A[B]CDEFGHIJKLMNOPQRSTUVWXYZ

INSTALL report for baySeq on tokay1

This page was generated on 2019-04-13 11:21:04 -0400 (Sat, 13 Apr 2019).

Package 107/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
baySeq 2.16.0
Thomas J. Hardcastle
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/baySeq
Branch: RELEASE_3_8
Last Commit: bc1df9c
Last Changed Date: 2018-10-30 11:41:45 -0400 (Tue, 30 Oct 2018)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: baySeq
Version: 2.16.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/baySeq_2.16.0.tar.gz && rm -rf baySeq.buildbin-libdir && mkdir baySeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=baySeq.buildbin-libdir baySeq_2.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL baySeq_2.16.0.zip && rm baySeq_2.16.0.tar.gz baySeq_2.16.0.zip
StartedAt: 2019-04-12 19:44:14 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:45:46 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 91.6 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/baySeq_2.16.0.tar.gz && rm -rf baySeq.buildbin-libdir && mkdir baySeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=baySeq.buildbin-libdir baySeq_2.16.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL baySeq_2.16.0.zip && rm baySeq_2.16.0.tar.gz baySeq_2.16.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  278k  100  278k    0     0  4610k      0 --:--:-- --:--:-- --:--:-- 4890k

install for i386

* installing *source* package 'baySeq' ...
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'baySeq'
    finding HTML links ... done
    CDPost                                  html  
    CDPriors                                html  
    allModels                               html  
    baySeq-classes                          html  
    baySeq-package                          html  
    bimodalSep                              html  
    densityFunction                         html  
    densityFunctions                        html  
    getLibsizes                             html  
    getLikelihoods                          html  
    getPosteriors                           html  
    getPriors                               html  
    getTPs                                  html  
    makeOrderings                           html  
    marginaliseEqual                        html  
    marginalisePairwise                     html  
    methObservables                         html  
    mobAnnotation                           html  
    mobData                                 html  
    pairData                                html  
    plotMA.CD                               html  
    plotNullPrior                           html  
    plotPosteriors                          html  
    plotPriors                              html  
    selectTop                               html  
    simData                                 html  
    summarisePosteriors                     html  
    topCounts                               html  
    zimData                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'baySeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'baySeq' as baySeq_2.16.0.zip
* DONE (baySeq)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'baySeq' successfully unpacked and MD5 sums checked
In R CMD INSTALL