Michael Love
| Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019) |
| URL: https://git.bioconductor.org/packages/alpine |
| Branch: RELEASE_3_8 |
| Last Commit: ddaa0b4 |
| Last Changed Date: 2018-10-30 11:42:02 -0400 (Tue, 30 Oct 2018) |
| Back to Multiple platform build/check report for BioC 3.8 |
|
This page was generated on 2019-04-13 11:27:01 -0400 (Sat, 13 Apr 2019).
| Package 40/1649 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| alpine 1.8.0 Michael Love
| malbec1 | Linux (Ubuntu 16.04.6 LTS) / x86_64 | OK | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | [ OK ] | OK | OK | OK | | ||||||
| merida1 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | OK | OK | |
| Package: alpine |
| Version: 1.8.0 |
| Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/alpine_1.8.0.tar.gz && rm -rf alpine.buildbin-libdir && mkdir alpine.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=alpine.buildbin-libdir alpine_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL alpine_1.8.0.zip && rm alpine_1.8.0.tar.gz alpine_1.8.0.zip |
| StartedAt: 2019-04-12 19:55:13 -0400 (Fri, 12 Apr 2019) |
| EndedAt: 2019-04-12 19:56:28 -0400 (Fri, 12 Apr 2019) |
| EllapsedTime: 74.8 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/alpine_1.8.0.tar.gz && rm -rf alpine.buildbin-libdir && mkdir alpine.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=alpine.buildbin-libdir alpine_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL alpine_1.8.0.zip && rm alpine_1.8.0.tar.gz alpine_1.8.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 194k 100 194k 0 0 5641k 0 --:--:-- --:--:-- --:--:-- 6277k
install for i386
* installing *source* package 'alpine' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'alpine'
finding HTML links ... done
alpine-package html
buildFragtypes html
estimateAbundance html
extractAlpine html
fitBiasModels html
getFragmentWidths html
getReadLength html
mergeGenes html
normalizeDESeq html
plotFragLen html
plotGC html
plotGRL html
plotOrder0 html
plotRelPos html
predictCoverage html
preprocessedData html
splitGenesAcrossChroms html
splitLongGenes html
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL
install for x64
* installing *source* package 'alpine' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'alpine' as alpine_1.8.0.zip
* DONE (alpine)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'alpine' successfully unpacked and MD5 sums checked
In R CMD INSTALL