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INSTALL report for BioCor on tokay1

This page was generated on 2019-04-13 11:27:39 -0400 (Sat, 13 Apr 2019).

Package 141/1649HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BioCor 1.6.1
LluĂ­s Revilla Sancho
Snapshot Date: 2019-04-12 17:01:30 -0400 (Fri, 12 Apr 2019)
URL: https://git.bioconductor.org/packages/BioCor
Branch: RELEASE_3_8
Last Commit: 421f8ca
Last Changed Date: 2019-02-02 10:35:57 -0400 (Sat, 02 Feb 2019)
malbec1 Linux (Ubuntu 16.04.6 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BioCor
Version: 1.6.1
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/BioCor_1.6.1.tar.gz && rm -rf BioCor.buildbin-libdir && mkdir BioCor.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioCor.buildbin-libdir BioCor_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL BioCor_1.6.1.zip && rm BioCor_1.6.1.tar.gz BioCor_1.6.1.zip
StartedAt: 2019-04-12 19:05:44 -0400 (Fri, 12 Apr 2019)
EndedAt: 2019-04-12 19:06:15 -0400 (Fri, 12 Apr 2019)
EllapsedTime: 30.6 seconds
RetCode: 0
Status:  OK  

Command output

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### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.8/bioc/src/contrib/BioCor_1.6.1.tar.gz && rm -rf BioCor.buildbin-libdir && mkdir BioCor.buildbin-libdir && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BioCor.buildbin-libdir BioCor_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.8-bioc\R\bin\R.exe CMD INSTALL BioCor_1.6.1.zip && rm BioCor_1.6.1.tar.gz BioCor_1.6.1.zip
###
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install for i386

* installing *source* package 'BioCor' ...
** R
** byte-compile and prepare package for lazy loading
Creating a generic function from function 'clusterGeneSim' in package 'BioCor'
Creating a generic function from function 'clusterSim' in package 'BioCor'
Creating a generic function from function 'geneSim' in package 'BioCor'
Creating a generic function from function 'mclusterGeneSim' in package 'BioCor'
Creating a generic function from function 'mclusterSim' in package 'BioCor'
Creating a generic function from function 'mgeneSim' in package 'BioCor'
Creating a generic function from function 'mpathSim' in package 'BioCor'
Creating a generic function from function 'pathSim' in package 'BioCor'
** help
*** installing help indices
  converting help for package 'BioCor'
    finding HTML links ... done
    AintoB                                  html  
    BioCor-package                          html  
    addSimilarities                         html  
    clusterGeneSim                          html  
    clusterSim                              html  
    combinadic                              html  
    combineScores                           html  
    combineSources                          html  
    conversions                             html  
    diceSim                                 html  
    duplicateIndices                        html  
    geneSim                                 html  
    incidence-list-method                   html  
    inverseList                             html  
    mclusterGeneSim                         html  
    mclusterSim                             html  
    mgeneSim                                html  
    mpathSim                                html  
    pathSim                                 html  
    removeDup                               html  
    seq2mat                                 html  
    similarities                            html  
    weighted                                html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'BioCor' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BioCor' as BioCor_1.6.1.zip
* DONE (BioCor)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.8-bioc/R/library'
package 'BioCor' successfully unpacked and MD5 sums checked
In R CMD INSTALL