| Back to Workflows build report for BioC 3.7 |
This page was generated on 2018-05-18 12:48:02 -0400 (Fri, 18 May 2018).
| Package 1/21 | Hostname | OS / Arch | INSTALL | BUILD | BUILD WEB VIG | ||||||
| annotation 1.2.0 Bioconductor Package Maintainer
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | [ OK ] |  |
| Package: annotation |
| Version: 1.2.0 |
| Command: /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'rmarkdown::render(".buildwebvig/annotation/Annotating_Genomic_Ranges.Rmd", output_format="BiocStyle:::html_fragment")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'knitr::purl(".buildwebvig/annotation/Annotating_Genomic_Ranges.Rmd", ".buildwebvig/annotation/Annotating_Genomic_Ranges.R")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'rmarkdown::render(".buildwebvig/annotation/Annotation_Resources.Rmd", output_format="BiocStyle:::html_fragment")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'knitr::purl(".buildwebvig/annotation/Annotation_Resources.Rmd", ".buildwebvig/annotation/Annotation_Resources.R")' |
| StartedAt: 2018-05-18 08:42:35 -0400 (Fri, 18 May 2018) |
| EndedAt: 2018-05-18 08:48:17 -0400 (Fri, 18 May 2018) |
| EllapsedTime: 342.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'rmarkdown::render(".buildwebvig/annotation/Annotating_Genomic_Ranges.Rmd", output_format="BiocStyle:::html_fragment")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'knitr::purl(".buildwebvig/annotation/Annotating_Genomic_Ranges.Rmd", ".buildwebvig/annotation/Annotating_Genomic_Ranges.R")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'rmarkdown::render(".buildwebvig/annotation/Annotation_Resources.Rmd", output_format="BiocStyle:::html_fragment")' && /home/biocbuild/bbs-3.7-bioc/R/bin/R -q -e 'knitr::purl(".buildwebvig/annotation/Annotation_Resources.Rmd", ".buildwebvig/annotation/Annotation_Resources.R")'
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> rmarkdown::render(".buildwebvig/annotation/Annotating_Genomic_Ranges.Rmd", output_format="BiocStyle:::html_fragment")
processing file: Annotating_Genomic_Ranges.Rmd
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output file: Annotating_Genomic_Ranges.knit.md
/usr/bin/pandoc +RTS -K512m -RTS Annotating_Genomic_Ranges.utf8.md --to html4 --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash+smart --output Annotating_Genomic_Ranges.html --email-obfuscation none --self-contained --wrap preserve --standalone --section-divs --table-of-contents --toc-depth 3 --template /home/biocbuild/bbs-3.7-bioc/R/library/BiocStyle/resources/fragment.html --no-highlight --number-sections --mathjax --variable 'mathjax-url:https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'
Output created: Annotating_Genomic_Ranges.html
>
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> knitr::purl(".buildwebvig/annotation/Annotating_Genomic_Ranges.Rmd", ".buildwebvig/annotation/Annotating_Genomic_Ranges.R")
processing file: .buildwebvig/annotation/Annotating_Genomic_Ranges.Rmd
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output file: .buildwebvig/annotation/Annotating_Genomic_Ranges.R
[1] ".buildwebvig/annotation/Annotating_Genomic_Ranges.R"
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> rmarkdown::render(".buildwebvig/annotation/Annotation_Resources.Rmd", output_format="BiocStyle:::html_fragment")
processing file: Annotation_Resources.Rmd
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output file: Annotation_Resources.knit.md
/usr/bin/pandoc +RTS -K512m -RTS Annotation_Resources.utf8.md --to html4 --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash+smart --output Annotation_Resources.html --email-obfuscation none --self-contained --wrap preserve --standalone --section-divs --table-of-contents --toc-depth 3 --template /home/biocbuild/bbs-3.7-bioc/R/library/BiocStyle/resources/fragment.html --no-highlight --number-sections --mathjax --variable 'mathjax-url:https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML'
Output created: Annotation_Resources.html
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> knitr::purl(".buildwebvig/annotation/Annotation_Resources.Rmd", ".buildwebvig/annotation/Annotation_Resources.R")
processing file: .buildwebvig/annotation/Annotation_Resources.Rmd
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output file: .buildwebvig/annotation/Annotation_Resources.R
[1] ".buildwebvig/annotation/Annotation_Resources.R"
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