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INSTALL report for clipper on tokay2

This page was generated on 2018-08-18 10:16:07 -0400 (Sat, 18 Aug 2018).

Package 254/1559HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
clipper 1.20.1
Paolo Martini
Snapshot Date: 2018-08-17 16:45:10 -0400 (Fri, 17 Aug 2018)
URL: https://git.bioconductor.org/packages/clipper
Branch: RELEASE_3_7
Last Commit: ef0a6fe
Last Changed Date: 2018-05-02 09:56:36 -0400 (Wed, 02 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: clipper
Version: 1.20.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/clipper_1.20.1.tar.gz && rm -rf clipper.buildbin-libdir && mkdir clipper.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clipper.buildbin-libdir clipper_1.20.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL clipper_1.20.1.zip && rm clipper_1.20.1.tar.gz clipper_1.20.1.zip
StartedAt: 2018-08-17 20:02:54 -0400 (Fri, 17 Aug 2018)
EndedAt: 2018-08-17 20:05:15 -0400 (Fri, 17 Aug 2018)
EllapsedTime: 141.4 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/clipper_1.20.1.tar.gz && rm -rf clipper.buildbin-libdir && mkdir clipper.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=clipper.buildbin-libdir clipper_1.20.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL clipper_1.20.1.zip && rm clipper_1.20.1.tar.gz clipper_1.20.1.zip
###
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install for i386

* installing *source* package 'clipper' ...
** R
** inst
** byte-compile and prepare package for lazy loading
No methods found in package 'GenomicRanges' for request: 'c' when loading 'qpgraph'
** help
*** installing help indices
  converting help for package 'clipper'
    finding HTML links ... done
    clipper                                 html  
    clipperAllRoots                         html  
    cliqueMeanTest                          html  
    cliqueMixedTest                         html  
    cliquePairedTest                        html  
    cliqueVarianceTest                      html  
    deleteEdge                              html  
    easyClip                                html  
    easyLook                                html  
    getGraphEntryGenes                      html  
    getJunctionTreePaths                    html  
    nameCliques                             html  
    pathwayTest                             html  
    plotInCytoscape                         html  
    prunePaths                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
No methods found in package 'GenomicRanges' for request: 'c' when loading 'qpgraph'
In R CMD INSTALL

install for x64

* installing *source* package 'clipper' ...
** testing if installed package can be loaded
No methods found in package 'GenomicRanges' for request: 'c' when loading 'qpgraph'
* MD5 sums
packaged installation of 'clipper' as clipper_1.20.1.zip
* DONE (clipper)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'clipper' successfully unpacked and MD5 sums checked
In R CMD INSTALL