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INSTALL report for anamiR on tokay2

This page was generated on 2018-10-17 08:43:03 -0400 (Wed, 17 Oct 2018).

Package 44/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
anamiR 1.8.0
Ti-Tai Wang
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/anamiR
Branch: RELEASE_3_7
Last Commit: 6d7c434
Last Changed Date: 2018-04-30 10:35:44 -0400 (Mon, 30 Apr 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  TIMEOUT  OK 
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: anamiR
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/anamiR_1.8.0.tar.gz && rm -rf anamiR.buildbin-libdir && mkdir anamiR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=anamiR.buildbin-libdir anamiR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL anamiR_1.8.0.zip && rm anamiR_1.8.0.tar.gz anamiR_1.8.0.zip
StartedAt: 2018-10-16 20:39:45 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 20:41:30 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 104.9 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/anamiR_1.8.0.tar.gz && rm -rf anamiR.buildbin-libdir && mkdir anamiR.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=anamiR.buildbin-libdir anamiR_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL anamiR_1.8.0.zip && rm anamiR_1.8.0.tar.gz anamiR_1.8.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 10.4M  100 10.4M    0     0  53.7M      0 --:--:-- --:--:-- --:--:-- 55.4M

install for i386

* installing *source* package 'anamiR' ...
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'anamiR'
    finding HTML links ... done
    GSEA_ana                                html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/GSEA_ana.Rd:11: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/GSEA_ana.Rd:14: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    GSEA_res                                html  
    anamiR                                  html  
    database_support                        html  
    differExp_continuous                    html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/differExp_continuous.Rd:10: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    differExp_discrete                      html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/differExp_discrete.Rd:12: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    egSymb                                  html  
    enrichment                              html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/enrichment.Rd:82: file link 'phyper' in package 'stats' does not exist and so has been treated as a topic
    heat_vis                                html  
    miR_converter                           html  
    mirna                                   html  
    mrna                                    html  
    msigdb.gs                               html  
    multi_Differ                            html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/multi_Differ.Rd:11: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    negative_cor                            html  
    normalization                           html  
Rd warning: C:/Users/biocbuild/bbs-3.7-bioc/tmpdir/RtmpG80agn/R.INSTALL1db87c24e00/anamiR/man/normalization.Rd:18: file link 'SummarizedExperiment' in package 'SummarizedExperiment' does not exist and so has been treated as a topic
    pheno.mirna                             html  
    pheno.mrna                              html  
    table_pre                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'anamiR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'anamiR' as anamiR_1.8.0.zip
* DONE (anamiR)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'anamiR' successfully unpacked and MD5 sums checked
In R CMD INSTALL