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INSTALL report for AnnotationDbi on tokay2

This page was generated on 2018-10-17 08:33:03 -0400 (Wed, 17 Oct 2018).

Package 51/1561HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AnnotationDbi 1.42.1
Bioconductor Package Maintainer
Snapshot Date: 2018-10-15 16:45:08 -0400 (Mon, 15 Oct 2018)
URL: https://git.bioconductor.org/packages/AnnotationDbi
Branch: RELEASE_3_7
Last Commit: 71085b4
Last Changed Date: 2018-05-07 14:49:06 -0400 (Mon, 07 May 2018)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
merida2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: AnnotationDbi
Version: 1.42.1
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/AnnotationDbi_1.42.1.tar.gz && rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationDbi.buildbin-libdir AnnotationDbi_1.42.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.42.1.zip && rm AnnotationDbi_1.42.1.tar.gz AnnotationDbi_1.42.1.zip
StartedAt: 2018-10-16 18:50:52 -0400 (Tue, 16 Oct 2018)
EndedAt: 2018-10-16 18:53:39 -0400 (Tue, 16 Oct 2018)
EllapsedTime: 167.3 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.7/bioc/src/contrib/AnnotationDbi_1.42.1.tar.gz && rm -rf AnnotationDbi.buildbin-libdir && mkdir AnnotationDbi.buildbin-libdir && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=AnnotationDbi.buildbin-libdir AnnotationDbi_1.42.1.tar.gz && C:\Users\biocbuild\bbs-3.7-bioc\R\bin\R.exe CMD INSTALL AnnotationDbi_1.42.1.zip && rm AnnotationDbi_1.42.1.tar.gz AnnotationDbi_1.42.1.zip
###
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100 3862k  100 3862k    0     0  46.6M      0 --:--:-- --:--:-- --:--:-- 50.2M

install for i386

* installing *source* package 'AnnotationDbi' ...
** R
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'packageName' in package 'AnnotationDbi'
Creating a generic function for 'ls' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'eapply' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'exists' from package 'base' in package 'AnnotationDbi'
Creating a generic function for 'sample' from package 'base' in package 'AnnotationDbi'
** help
*** installing help indices
  converting help for package 'AnnotationDbi'
    finding HTML links ... done
    AnnDbObj-class                          html  
    AnnDbPkg-checker                        html  
    AnnotationDb-class                      html  
    AnnotationDbi-internals                 html  
    Bimap-direction                         html  
    Bimap-envirAPI                          html  
    Bimap-keys                              html  
    Bimap-toTable                           html  
    Bimap                                   html  
    BimapFiltering                          html  
    BimapFormatting                         html  
    GOColsAndKeytypes                       html  
    GOFrame                                 html  
    GOTerms-class                           html  
    InparanoidColsAndKeytypes               html  
    KEGGFrame                               html  
    colsAndKeytypes                         html  
    createSimpleBimap                       html  
    inpIDMapper                             html  
    makeGOGraph                             html  
    make_eg_to_go_map                       html  
    orgPackageName                          html  
    print.probetable                        html  
    toSQLStringSet                          html  
    unlist2                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded
In R CMD INSTALL

install for x64

* installing *source* package 'AnnotationDbi' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'AnnotationDbi' as AnnotationDbi_1.42.1.zip
* DONE (AnnotationDbi)
In R CMD INSTALL
In R CMD INSTALL
* installing to library 'C:/Users/biocbuild/bbs-3.7-bioc/R/library'
package 'AnnotationDbi' successfully unpacked and MD5 sums checked
In R CMD INSTALL