Jan Oosting
| Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018) |
| URL: https://git.bioconductor.org/packages/beadarraySNP |
| Branch: RELEASE_3_6 |
| Last Commit: c024b7b |
| Last Changed Date: 2017-10-30 12:39:17 -0400 (Mon, 30 Oct 2017) |
| Back to Multiple platform build/check report for BioC 3.6 |
|
This page was generated on 2018-04-12 13:18:24 -0400 (Thu, 12 Apr 2018).
| Package 103/1472 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| beadarraySNP 1.44.0 Jan Oosting
| malbec1 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | NotNeeded | OK | OK | | ||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | NotNeeded | OK | OK | [ OK ] | | ||||||
| veracruz1 | OS X 10.11.6 El Capitan / x86_64 | NotNeeded | OK | OK | OK | |
| Package: beadarraySNP |
| Version: 1.44.0 |
| Command: cd beadarraySNP.buildbin-libdir/beadarraySNP && zip -r ../../beadarraySNP_1.44.0.zip . & cd ../.. |
| StartedAt: 2018-04-12 04:25:31 -0400 (Thu, 12 Apr 2018) |
| EndedAt: 2018-04-12 04:26:08 -0400 (Thu, 12 Apr 2018) |
| EllapsedTime: 37.4 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: beadarraySNP_1.44.0.zip |
| PackageFileSize: 1.688 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### cd beadarraySNP.buildbin-libdir/beadarraySNP && zip -r ../../beadarraySNP_1.44.0.zip . & cd ../.. ### ############################################################################## ############################################################################## adding: data/ (372 bytes security) (stored 0%) adding: data/chr17.260.rda (332 bytes security) (deflated 0%) adding: data/QC.260.rda (332 bytes security) (stored 0%) adding: DESCRIPTION (332 bytes security) (deflated 36%) adding: doc/ (372 bytes security) (stored 0%) adding: doc/beadarraySNP.pdf (332 bytes security) (deflated 10%) adding: doc/beadarraySNP.R (332 bytes security) (deflated 72%) adding: doc/beadarraySNP.rnw (332 bytes security) (deflated 56%) adding: doc/index.html (332 bytes security) (deflated 60%) adding: help/ (372 bytes security) (stored 0%) adding: help/aliases.rds (332 bytes security) (stored 0%) adding: help/AnIndex (332 bytes security) (deflated 76%) adding: help/beadarraySNP.rdb (332 bytes security) (deflated 1%) adding: help/beadarraySNP.rdx (332 bytes security) (stored 0%) adding: help/paths.rds (332 bytes security) (stored 0%) adding: html/ (372 bytes security) (stored 0%) adding: html/00Index.html (332 bytes security) (deflated 84%) adding: html/alterCN.html (332 bytes security) (deflated 56%) adding: html/arrayType.html (332 bytes security) (deflated 54%) adding: html/backgroundCorrect.SNP.html (332 bytes security) (deflated 57%) adding: html/backgroundEstimate.html (332 bytes security) (deflated 60%) adding: html/BeadstudioQC.html (332 bytes security) (deflated 57%) adding: html/calculateLOH.html (332 bytes security) (deflated 58%) adding: html/calculateQCarray.html (332 bytes security) (deflated 58%) adding: html/class.SnpSetIllumina.html (332 bytes security) (deflated 75%) adding: html/compareGenotypes.html (332 bytes security) (deflated 60%) adding: html/CopynumberConversion.html (332 bytes security) (deflated 58%) adding: html/createCNSummary.html (332 bytes security) (deflated 59%) adding: html/Datasets.html (332 bytes security) (deflated 45%) adding: html/dist.GT.html (332 bytes security) (deflated 50%) adding: html/GenomicReports.html (332 bytes security) (deflated 69%) adding: html/GetBeadStudioSampleNames.html (332 bytes security) (deflated 52%) adding: html/getDNAindex.html (332 bytes security) (deflated 52%) adding: html/heterozygosity.html (332 bytes security) (deflated 55%) adding: html/heterozygousSNPs.html (332 bytes security) (deflated 59%) adding: html/interactiveCNselect.html (332 bytes security) (deflated 57%) adding: html/normalizeBetweenAlleles.SNP.html (332 bytes security) (deflated 56%) adding: html/normalizeBetweenSubsamples.SNP.html (332 bytes security) (deflated 56%) adding: html/normalizeLoci.SNP.html (332 bytes security) (deflated 62%) adding: html/normalizeWithinArrays.SNP.html (332 bytes security) (deflated 62%) adding: html/pdfChromosomesSmoothCopyNumber.html (332 bytes security) (deflated 57%) adding: html/pdfQC.html (332 bytes security) (deflated 54%) adding: html/plotGoldenGate4OPA.html (332 bytes security) (deflated 61%) adding: html/plotQC.html (332 bytes security) (deflated 51%) adding: html/PolarTransforms.html (332 bytes security) (deflated 55%) adding: html/QCIllumina-class.html (332 bytes security) (deflated 65%) adding: html/R.css (332 bytes security) (deflated 75%) adding: html/read.SnpSetIllumina.html (332 bytes security) (deflated 68%) adding: html/removeLowQualityProbes.html (332 bytes security) (deflated 52%) adding: html/removeLowQualitySamples.html (332 bytes security) (deflated 56%) adding: html/renameOPA.html (332 bytes security) (deflated 51%) adding: html/reportGenotypeSegmentation.html (332 bytes security) (deflated 56%) adding: html/reportSamplePanelQC-methods.html (332 bytes security) (deflated 51%) adding: html/Sample_Map2Samplesheet.html (332 bytes security) (deflated 56%) adding: html/segmentate.html (332 bytes security) (deflated 58%) adding: html/setRealCN.html (332 bytes security) (deflated 56%) adding: html/smoothed.intensity.html (332 bytes security) (deflated 52%) adding: html/SnpSetSegments-class.html (332 bytes security) (deflated 70%) adding: html/standardNormalization.html (332 bytes security) (deflated 55%) adding: INDEX (332 bytes security) (deflated 65%) adding: MD5 (332 bytes security) (deflated 47%) adding: Meta/ (372 bytes security) (stored 0%) adding: Meta/data.rds (332 bytes security) (stored 0%) adding: Meta/features.rds (332 bytes security) (stored 0%) adding: Meta/hsearch.rds (332 bytes security) (stored 0%) adding: Meta/links.rds (332 bytes security) (stored 0%) adding: Meta/nsInfo.rds (332 bytes security) (stored 0%) adding: Meta/package.rds (332 bytes security) (stored 0%) adding: Meta/Rd.rds (332 bytes security) (stored 0%) adding: Meta/vignette.rds (332 bytes security) (stored 0%) adding: NAMESPACE (332 bytes security) (deflated 60%) adding: R/ (372 bytes security) (stored 0%) adding: R/beadarraySNP (332 bytes security) (deflated 41%) adding: R/beadarraySNP.rdb (332 bytes security) (deflated 14%) adding: R/beadarraySNP.rdx (332 bytes security) (stored 0%) adding: testdata/ (372 bytes security) (stored 0%) adding: testdata/11186795_GS0005704-OPA_LinkageIV_v3.opa (332 bytes security) (deflated 73%) adding: testdata/1280260_R002_C012.csv (332 bytes security) (deflated 54%) adding: testdata/1280260_R003_C012.csv (332 bytes security) (deflated 54%) adding: testdata/1280260_R007_C010.csv (332 bytes security) (deflated 54%) adding: testdata/1280260_R008_C010.csv (332 bytes security) (deflated 54%) adding: testdata/4samples_opa4.csv (332 bytes security) (deflated 54%) adding: testdata/GS0005704-OPA_LocusByDNA.csv (332 bytes security) (deflated 62%) adding: testdata/targets.txt (332 bytes security) (deflated 37%)