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BUILD BIN report for AllelicImbalance on tokay1

This page was generated on 2018-04-12 13:23:24 -0400 (Thu, 12 Apr 2018).

Package 35/1472HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
AllelicImbalance 1.16.0
Jesper R Gadin
Snapshot Date: 2018-04-11 16:45:18 -0400 (Wed, 11 Apr 2018)
URL: https://git.bioconductor.org/packages/AllelicImbalance
Branch: RELEASE_3_6
Last Commit: 85f652a
Last Changed Date: 2017-10-30 12:40:08 -0400 (Mon, 30 Oct 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64  NotNeeded  OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  WARNINGS [ OK ]UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: AllelicImbalance
Version: 1.16.0
Command: cd AllelicImbalance.buildbin-libdir/AllelicImbalance && zip -r ../../AllelicImbalance_1.16.0.zip . & cd ../..
StartedAt: 2018-04-12 04:22:47 -0400 (Thu, 12 Apr 2018)
EndedAt: 2018-04-12 04:23:31 -0400 (Thu, 12 Apr 2018)
EllapsedTime: 44.5 seconds
RetCode: 0
Status:  OK  
PackageFile: AllelicImbalance_1.16.0.zip
PackageFileSize: 2.381 MiB

Command output

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###
### Running command:
###
###   cd AllelicImbalance.buildbin-libdir/AllelicImbalance && zip -r ../../AllelicImbalance_1.16.0.zip . & cd ../..
###
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  adding: DESCRIPTION (332 bytes security) (deflated 53%)
  adding: doc/ (372 bytes security) (stored 0%)
  adding: doc/AllelicImbalance-vignette.pdf (332 bytes security) (deflated 26%)
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  adding: doc/AllelicImbalance-vignette.Rmd (332 bytes security) (deflated 65%)
  adding: doc/index.html (332 bytes security) (deflated 62%)
  adding: extdata/ (372 bytes security) (stored 0%)
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  adding: extdata/ERP000101_subset/ERR009167.bam.bai (332 bytes security) (deflated 100%)
  adding: extdata/hg19.chr17.subset.fa (332 bytes security) (deflated 53%)
  adding: extdata/hg19.chr17.subset.fa.fai (332 bytes security) (deflated 12%)
  adding: help/ (372 bytes security) (stored 0%)
  adding: help/aliases.rds (332 bytes security) (stored 0%)
  adding: help/AllelicImbalance.rdb (332 bytes security) (deflated 1%)
  adding: help/AllelicImbalance.rdx (332 bytes security) (stored 0%)
  adding: help/AnIndex (332 bytes security) (deflated 83%)
  adding: help/paths.rds (332 bytes security) (stored 0%)
  adding: html/ (372 bytes security) (stored 0%)
  adding: html/00Index.html (332 bytes security) (deflated 90%)
  adding: html/AllelicImbalance-package.html (332 bytes security) (deflated 57%)
  adding: html/annotation-wrappers.html (332 bytes security) (deflated 69%)
  adding: html/annotationBarplot.html (332 bytes security) (deflated 60%)
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  adding: html/ASEset-glocationplot.html (332 bytes security) (deflated 60%)
  adding: html/ASEset-gviztrack.html (332 bytes security) (deflated 62%)
  adding: html/ASEset-scanForHeterozygotes.html (332 bytes security) (deflated 61%)
  adding: html/ASEset.old.html (332 bytes security) (deflated 42%)
  adding: html/ASEset.sim.html (332 bytes security) (deflated 42%)
  adding: html/ASEsetFromBam.html (332 bytes security) (deflated 57%)
  adding: html/barplot-lattice-support.html (332 bytes security) (deflated 52%)
  adding: html/binom.test.html (332 bytes security) (deflated 51%)
  adding: html/chisq.test.html (332 bytes security) (deflated 51%)
  adding: html/cigar-utilities.html (332 bytes security) (deflated 59%)
  adding: html/countAllelesFromBam.html (332 bytes security) (deflated 55%)
  adding: html/coverageMatrixListFromGAL.html (332 bytes security) (deflated 54%)
  adding: html/decorateWithExons.html (332 bytes security) (deflated 58%)
  adding: html/decorateWithGenes.html (332 bytes security) (deflated 58%)
  adding: html/defaultMapBias.html (332 bytes security) (deflated 52%)
  adding: html/defaultPhase.html (332 bytes security) (deflated 50%)
  adding: html/detectAI.html (332 bytes security) (deflated 61%)
  adding: html/DetectedAI-class.html (332 bytes security) (deflated 60%)
  adding: html/DetectedAI-plot.html (332 bytes security) (deflated 67%)
  adding: html/DetectedAI-summary.html (332 bytes security) (deflated 60%)
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  adding: html/gba.html (332 bytes security) (deflated 54%)
  adding: html/genomatrix.html (332 bytes security) (deflated 43%)
  adding: html/genotype2phase.html (332 bytes security) (deflated 54%)
  adding: html/getAlleleCounts.html (332 bytes security) (deflated 58%)
  adding: html/getAlleleQuality.html (332 bytes security) (deflated 57%)
  adding: html/getAreaFromGeneNames.html (332 bytes security) (deflated 58%)
  adding: html/getDefaultMapBiasExpMean.html (332 bytes security) (deflated 54%)
  adding: html/getSnpIdFromLocation.html (332 bytes security) (deflated 56%)
  adding: html/GlobalAnalysis-class.html (332 bytes security) (deflated 51%)
  adding: html/GRvariants.html (332 bytes security) (deflated 45%)
  adding: html/histplot.html (332 bytes security) (deflated 52%)
  adding: html/implodeList-old.html (332 bytes security) (deflated 48%)
  adding: html/import-bam-2.html (332 bytes security) (deflated 54%)
  adding: html/import-bam.html (332 bytes security) (deflated 55%)
  adding: html/import-bcf.html (332 bytes security) (deflated 56%)
  adding: html/inferAlleles.html (332 bytes security) (deflated 58%)
  adding: html/inferAltAllele.html (332 bytes security) (deflated 54%)
  adding: html/inferGenotypes.html (332 bytes security) (deflated 57%)
  adding: html/initialize-ASEset.html (332 bytes security) (deflated 68%)
  adding: html/initialize-DetectedAI.html (332 bytes security) (deflated 67%)
  adding: html/initialize-GlobalAnalysis.html (332 bytes security) (deflated 49%)
  adding: html/initialize-RiskVariant.html (332 bytes security) (deflated 51%)
  adding: html/legendBarplot.html (332 bytes security) (deflated 64%)
  adding: html/LinkVariantAlmlof-class.html (332 bytes security) (deflated 50%)
  adding: html/LinkVariantAlmlof-plot.html (332 bytes security) (deflated 54%)
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  adding: html/lva.html (332 bytes security) (deflated 61%)
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  adding: html/makeMaskedFasta.html (332 bytes security) (deflated 56%)
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  adding: html/minCountFilt.html (332 bytes security) (deflated 57%)
  adding: html/minFreqFilt.html (332 bytes security) (deflated 56%)
  adding: html/multiAllelicFilt.html (332 bytes security) (deflated 56%)
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  adding: html/phaseArray2phaseMatrix.html (332 bytes security) (deflated 54%)
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  adding: html/reads.html (332 bytes security) (deflated 42%)
  adding: html/refAllele.html (332 bytes security) (deflated 49%)
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  adding: html/scanForHeterozygotes-old.html (332 bytes security) (deflated 58%)
  adding: INDEX (332 bytes security) (deflated 70%)
  adding: MD5 (332 bytes security) (deflated 56%)
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  adding: Meta/hsearch.rds (332 bytes security) (deflated 2%)
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  adding: Meta/nsInfo.rds (332 bytes security) (stored 0%)
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  adding: Meta/Rd.rds (332 bytes security) (stored 0%)
  adding: Meta/vignette.rds (332 bytes security) (stored 0%)
  adding: NAMESPACE (332 bytes security) (deflated 79%)
  adding: NEWS (332 bytes security) (deflated 58%)
  adding: R/ (372 bytes security) (stored 0%)
  adding: R/AllelicImbalance (332 bytes security) (deflated 41%)
  adding: R/AllelicImbalance.rdb (332 bytes security) (deflated 43%)
  adding: R/AllelicImbalance.rdx (332 bytes security) (deflated 3%)