Back to the "Multiple platform build/check report" A [B] C  D  E  F  G  H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

BioC 3.5: INSTALL report for BiocStyle on tokay2

This page was generated on 2017-10-18 14:22:42 -0400 (Wed, 18 Oct 2017).

Package 122/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
BiocStyle 2.4.1
Bioconductor Package Maintainer
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/BiocStyle
Branch: RELEASE_3_5
Last Commit: ef10764
Last Changed Date: 2017-07-21 06:37:48 -0400 (Fri, 21 Jul 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: BiocStyle
Version: 2.4.1
Command: rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/BiocStyle_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL BiocStyle_2.4.1.zip && rm BiocStyle_2.4.1.tar.gz BiocStyle_2.4.1.zip
StartedAt: 2017-10-17 18:18:30 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 18:20:03 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 93.0 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf BiocStyle.buildbin-libdir && mkdir BiocStyle.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/BiocStyle_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=BiocStyle.buildbin-libdir --merge-multiarch BiocStyle_2.4.1.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL BiocStyle_2.4.1.zip  && rm BiocStyle_2.4.1.tar.gz BiocStyle_2.4.1.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 60913  100 60913    0     0  2020k      0 --:--:-- --:--:-- --:--:-- 2124k

install for i386

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

Warning in untar2(tarfile, files, list, exdir, restore_times) :
  failed to copy 'BiocStyle/vignettes/../inst/rmarkdown/templates/html_document/skeleton/skeleton.Rmd' to 'BiocStyle/vignettes/HtmlStyle.Rmd'
* installing *source* package 'BiocStyle' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BiocStyle' as BiocStyle_2.4.1.zip
* DONE (BiocStyle)
* installing to library 'C:/Users/biocbuild/bbs-3.5-bioc/R/library'
package 'BiocStyle' successfully unpacked and MD5 sums checked