cnvGSAdata 1.8.0
Joseph Lugo
| Snapshot Date: 2016-10-08 07:15:25 -0700 (Sat, 08 Oct 2016) | | URL: https://hedgehog.fhcrc.org/bioc-data/branches/RELEASE_3_3/experiment/pkgs/cnvGSAdata | | Last Changed Rev: 3760 / Revision: 3935 | | Last Changed Date: 2016-05-03 14:35:06 -0700 (Tue, 03 May 2016) |
| zin2 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | WARNINGS | |  |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ WARNINGS ] | OK | |
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### Running command:
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### rm -rf cnvGSAdata.buildbin-libdir cnvGSAdata.Rcheck && mkdir cnvGSAdata.buildbin-libdir cnvGSAdata.Rcheck && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=cnvGSAdata.buildbin-libdir cnvGSAdata_1.8.0.tar.gz >cnvGSAdata.Rcheck\00install.out 2>&1 && cp cnvGSAdata.Rcheck\00install.out cnvGSAdata-install.out && E:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=cnvGSAdata.buildbin-libdir --install="check:cnvGSAdata-install.out" --force-multiarch --no-vignettes --timings cnvGSAdata_1.8.0.tar.gz
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* using log directory 'E:/biocbld/bbs-3.3-data-experiment/meat/cnvGSAdata.Rcheck'
* using R version 3.3.1 (2016-06-21)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'cnvGSAdata/DESCRIPTION' ... OK
* this is package 'cnvGSAdata' version '1.8.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'cnvGSAdata' can be installed ... OK
* checking installed package size ... NOTE
installed size is 9.0Mb
sub-directories of 1Mb or more:
data 5.2Mb
extdata 3.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... WARNING
Note: significantly better compression could be obtained
by using R CMD build --resave-data
old_size new_size compress
cnvGSA_input_example.RData 2.4Mb 1.2Mb xz
cnvGSA_output_example.RData 2.5Mb 768Kb xz
gs_data_example.RData 310Kb 207Kb xz
* checking examples ...
** running examples for arch 'i386' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
enrGMT_AGP_demo.gmt 7.44 0.03 7.47
** running examples for arch 'x64' ... OK
Examples with CPU or elapsed time > 5s
user system elapsed
enrGMT_AGP_demo.gmt 5.09 0.04 5.15
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 1 NOTE
See
'E:/biocbld/bbs-3.3-data-experiment/meat/cnvGSAdata.Rcheck/00check.log'
for details.
install for i386
* installing *source* package 'cnvGSAdata' ...
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
install for x64
* installing *source* package 'cnvGSAdata' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'cnvGSAdata' as cnvGSAdata_1.8.0.zip
* DONE (cnvGSAdata)